Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86010 | Canola | nucleus | 93.6 | 94.64 |
| CDY04118 | Canola | nucleus | 21.63 | 82.35 |
| CDY09390 | Canola | nucleus | 21.19 | 80.67 |
| AT3G45260.1 | Thale cress | nucleus | 78.81 | 80.04 |
| CDY14910 | Canola | nucleus | 21.85 | 74.44 |
| CDY72283 | Canola | nucleus | 28.04 | 67.2 |
| CDY37489 | Canola | nucleus | 26.27 | 64.67 |
| CDY53540 | Canola | nucleus | 26.27 | 61.34 |
| CDY04117 | Canola | nucleus | 27.59 | 58.41 |
| CDY70142 | Canola | nucleus | 21.85 | 54.4 |
| Bra038293.1-P | Field mustard | nucleus | 98.01 | 50.11 |
| CDX96046 | Canola | nucleus | 22.52 | 43.78 |
| CDX97281 | Canola | nucleus, plastid | 35.32 | 41.56 |
| CDY24490 | Canola | nucleus | 39.07 | 40.69 |
| CDX77936 | Canola | nucleus | 39.07 | 40.6 |
| CDX91304 | Canola | nucleus, plastid | 35.32 | 39.6 |
| CDX89862 | Canola | nucleus | 39.96 | 37.71 |
| CDY18188 | Canola | nucleus | 39.74 | 37.58 |
| CDX94759 | Canola | nucleus | 38.19 | 37.28 |
| CDY22307 | Canola | nucleus | 38.19 | 37.28 |
| CDX75732 | Canola | nucleus | 36.2 | 37.02 |
| CDY32514 | Canola | nucleus | 39.74 | 36.73 |
| CDX82515 | Canola | nucleus | 35.76 | 36.73 |
| CDY67009 | Canola | nucleus | 38.41 | 36.55 |
| CDY45271 | Canola | nucleus | 33.55 | 36.54 |
| CDY59418 | Canola | nucleus | 32.89 | 36.08 |
| CDX81372 | Canola | nucleus | 38.63 | 35.79 |
| CDY57128 | Canola | nucleus | 38.85 | 35.77 |
| CDY44344 | Canola | nucleus | 39.29 | 35.6 |
| CDY11241 | Canola | nucleus | 39.29 | 35.39 |
| CDX97521 | Canola | nucleus | 37.75 | 35.26 |
| CDY10404 | Canola | nucleus | 39.29 | 35.11 |
| CDY55238 | Canola | nucleus | 37.53 | 34.98 |
| CDY45270 | Canola | nucleus | 34.66 | 34.89 |
| CDX80854 | Canola | nucleus | 38.85 | 34.85 |
| CDY51742 | Canola | nucleus | 36.87 | 34.5 |
| CDX70328 | Canola | nucleus | 38.63 | 34.05 |
| CDY17440 | Canola | nucleus | 35.76 | 33.89 |
| CDX81653 | Canola | nucleus | 34.44 | 33.4 |
| CDY03081 | Canola | nucleus | 38.41 | 33.21 |
| CDY15814 | Canola | nucleus | 34.44 | 32.98 |
| CDY17615 | Canola | nucleus | 37.97 | 32.64 |
| CDY17614 | Canola | nucleus, plastid | 36.87 | 32.55 |
| CDY03080 | Canola | nucleus, plastid | 36.87 | 32.36 |
| CDY15811 | Canola | nucleus | 38.85 | 30.99 |
| CDY09391 | Canola | nucleus | 38.63 | 30.86 |
| CDY36123 | Canola | nucleus | 24.94 | 29.89 |
| CDY51986 | Canola | nucleus | 24.94 | 29.89 |
| CDY60366 | Canola | nucleus | 24.94 | 29.5 |
| CDX84974 | Canola | nucleus | 24.72 | 29.24 |
| CDY12268 | Canola | nucleus | 28.48 | 28.92 |
| CDY04204 | Canola | nucleus | 22.74 | 28.69 |
| CDY04203 | Canola | plastid | 22.96 | 27.01 |
| CDY09400 | Canola | nucleus | 26.05 | 26.94 |
| CDY68983 | Canola | nucleus | 23.18 | 26.85 |
| CDY17620 | Canola | nucleus | 26.27 | 26.8 |
| CDY15800 | Canola | nucleus | 26.05 | 26.7 |
| CDY67587 | Canola | cytosol, nucleus | 13.24 | 26.67 |
| CDY07400 | Canola | nucleus | 24.28 | 26.63 |
| CDY60095 | Canola | nucleus | 25.83 | 26.47 |
| CDY70938 | Canola | cytosol, nucleus | 15.89 | 26.37 |
| CDY04102 | Canola | nucleus | 25.83 | 26.06 |
| CDY63960 | Canola | nucleus | 25.83 | 25.94 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:A0A078IV73 | UniProt:A0A078IV73 | EnsemblPlants:CDY53836 | ProteinID:CDY53836 |
| ProteinID:CDY53836.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00011525001 |
| InterPro:IPR013087 | InterPro:JKD-like | PFAM:PF12171 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF42 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EF0D11 | InterPro:Znf_C2H2_jaz | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
BnaA06g38780DBnaA06g38780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IV73]
Coordinates
chrLK033242:-:10215..12367
Molecular Weight (calculated)
50815.8 Da
IEP (calculated)
9.924
GRAVY (calculated)
-0.805
Length
453 amino acids
Sequence
(BLAST)
(BLAST)
001: MIIPDDHHHL SFPSYVLHQE HITPNPNPNP NPTASNSNKR KRNLPGNPGM YNPDAEVIAL SPNSLMTTNR FICEICNKGF KRDQNLQLHR RGHNLPWKLK
101: QRTDKEQVKK KVYICPEKTC VHHDPGRALG DLTGIKKHFS RKHGEKKWKC DKCSKKYAVV SDWKAHSKIC GTREYKCDCG TLFSRKDSFI THRAFCDALA
201: EESARFASVP PAAAAYLNNS SDAEVNLGNI KPNHQQRLLD LTSSQLDRHG FNVNRNNING FMGQSSTNQL PLAANVFASS SSPSPHSASA LLQNLWQLQG
301: QSYQQWLLNK NNNNIIQSGM PNNQEDHDTI RRELVINGSS FSSEARTSYN QNGGQEIASM SATTLLQMAA QIGSKRSSSS SNNGMAFGLV TSSIFNNKEM
401: ENKIKTKEFD ERGFTRDFLG VGSQNRHRPI LMVNHNLPTT NDGTPTTYMN HKT
101: QRTDKEQVKK KVYICPEKTC VHHDPGRALG DLTGIKKHFS RKHGEKKWKC DKCSKKYAVV SDWKAHSKIC GTREYKCDCG TLFSRKDSFI THRAFCDALA
201: EESARFASVP PAAAAYLNNS SDAEVNLGNI KPNHQQRLLD LTSSQLDRHG FNVNRNNING FMGQSSTNQL PLAANVFASS SSPSPHSASA LLQNLWQLQG
301: QSYQQWLLNK NNNNIIQSGM PNNQEDHDTI RRELVINGSS FSSEARTSYN QNGGQEIASM SATTLLQMAA QIGSKRSSSS SNNGMAFGLV TSSIFNNKEM
401: ENKIKTKEFD ERGFTRDFLG VGSQNRHRPI LMVNHNLPTT NDGTPTTYMN HKT
001: MMMPDDHHPL SFPSYVLHQE HIAPNPNPNP NPTSSNSAKR KRNLPGNPDP DAEVIALSPN SLMTTNRFIC EVCNKGFKRD QNLQLHRRGH NLPWKLKQRT
101: NKEQVKKKVY ICPEKTCVHH DPARALGDLT GIKKHFSRKH GEKKWKCDKC SKKYAVMSDW KAHSKICGTK EYRCDCGTLF SRKDSFITHR AFCDALAEES
201: ARFVSVPPAP AYLNNALDVE VNHGNINQNH QQRQLNTTSS QLDQPGFNTN RNNIAFLGQT LPTNVFASSS SPSPRSASDS LQNLWHLQGQ SSHQWLLNEN
301: NNNNNNILQR GISKNQEEHE MKNVISNGSL FSSEARNNTN NYNQNGGQIA SMSATALLQK AAQMGSKRSS SSSSNSKTFG LMTSIFNNKQ AENIKTKEVD
401: ERGFTRDFLG VGSQHRSWPL LMVNHNLPDS SPPASTDGTP TADMNQ
101: NKEQVKKKVY ICPEKTCVHH DPARALGDLT GIKKHFSRKH GEKKWKCDKC SKKYAVMSDW KAHSKICGTK EYRCDCGTLF SRKDSFITHR AFCDALAEES
201: ARFVSVPPAP AYLNNALDVE VNHGNINQNH QQRQLNTTSS QLDQPGFNTN RNNIAFLGQT LPTNVFASSS SPSPRSASDS LQNLWHLQGQ SSHQWLLNEN
301: NNNNNNILQR GISKNQEEHE MKNVISNGSL FSSEARNNTN NYNQNGGQIA SMSATALLQK AAQMGSKRSS SSSSNSKTFG LMTSIFNNKQ AENIKTKEVD
401: ERGFTRDFLG VGSQHRSWPL LMVNHNLPDS SPPASTDGTP TADMNQ
Arabidopsis Description
IDD9Protein indeterminate-domain 9 [Source:UniProtKB/Swiss-Prot;Acc:Q944L3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.