Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12268 | Canola | nucleus | 91.56 | 80.27 |
| Bra023223.1-P | Field mustard | plastid | 94.12 | 76.67 |
| CDY04118 | Canola | nucleus | 18.16 | 59.66 |
| CDY09390 | Canola | nucleus | 17.65 | 57.98 |
| CDY53540 | Canola | nucleus | 18.67 | 37.63 |
| CDY37489 | Canola | nucleus | 17.14 | 36.41 |
| CDY14910 | Canola | nucleus | 11.76 | 34.59 |
| CDY04117 | Canola | nucleus | 18.93 | 34.58 |
| CDY72283 | Canola | nucleus | 16.62 | 34.39 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 28.9 | 31.04 |
| CDY45271 | Canola | nucleus | 31.97 | 30.05 |
| KRG89168 | Soybean | nucleus, plastid | 26.09 | 29.31 |
| CDY45270 | Canola | nucleus | 32.74 | 28.44 |
| GSMUA_Achr9P23870_001 | Banana | nucleus | 31.46 | 28.34 |
| GSMUA_Achr5P11770_001 | Banana | nucleus, plastid | 28.39 | 27.89 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 32.74 | 27.06 |
| GSMUA_Achr3P13990_001 | Banana | nucleus | 29.16 | 26.76 |
| GSMUA_Achr4P11810_001 | Banana | mitochondrion, nucleus | 33.5 | 26.73 |
| GSMUA_Achr1P17940_001 | Banana | nucleus | 31.71 | 26.55 |
| CDY59418 | Canola | nucleus | 27.88 | 26.39 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 32.48 | 25.97 |
| GSMUA_Achr1P07110_001 | Banana | nucleus | 30.95 | 24.9 |
| CDY70142 | Canola | nucleus | 11.51 | 24.73 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 35.81 | 24.48 |
| GSMUA_Achr10P... | Banana | nucleus | 29.92 | 24.43 |
| TraesCS5A01G356100.1 | Wheat | nucleus, plastid | 33.76 | 24.22 |
| TraesCS5B01G358600.1 | Wheat | nucleus, plastid | 33.76 | 24.18 |
| Zm00001d021403_P001 | Maize | nucleus | 29.92 | 24.17 |
| TraesCS5D01G364900.1 | Wheat | nucleus, plastid | 33.76 | 24.13 |
| Os09t0555700-02 | Rice | nucleus | 32.74 | 23.93 |
| KRH49489 | Soybean | nucleus, plastid | 32.48 | 23.83 |
| KRG90705 | Soybean | nucleus | 34.53 | 23.81 |
| CDX86010 | Canola | nucleus | 27.11 | 23.66 |
| CDY24490 | Canola | nucleus | 26.09 | 23.45 |
| CDX77936 | Canola | nucleus | 26.09 | 23.39 |
| CDX81653 | Canola | nucleus | 27.88 | 23.34 |
| KRH36039 | Soybean | nucleus | 34.02 | 23.29 |
| CDY17440 | Canola | nucleus | 28.39 | 23.22 |
| KRH49485 | Soybean | nucleus | 32.23 | 23.2 |
| CDY53836 | Canola | nucleus | 26.85 | 23.18 |
| CDX97281 | Canola | nucleus, plastid | 22.76 | 23.12 |
| KRG91985 | Soybean | nucleus | 32.99 | 23.04 |
| KRH34792 | Soybean | nucleus | 32.48 | 22.88 |
| Solyc04g008500.2.1 | Tomato | nucleus | 30.18 | 22.82 |
| PGSC0003DMT400075837 | Potato | nucleus | 30.18 | 22.78 |
| GSMUA_Achr11P... | Banana | nucleus | 30.69 | 22.51 |
| GSMUA_Achr1P02080_001 | Banana | nucleus | 31.46 | 22.49 |
| AT1G14580.3 | Thale cress | nucleus | 27.62 | 22.45 |
| KRG89167 | Soybean | nucleus, plastid | 31.46 | 22.4 |
| CDY17615 | Canola | nucleus | 29.92 | 22.2 |
| CDY15811 | Canola | nucleus | 32.23 | 22.18 |
| CDY03081 | Canola | nucleus | 29.67 | 22.14 |
| CDX91304 | Canola | nucleus, plastid | 22.76 | 22.03 |
| GSMUA_Achr4P05240_001 | Banana | nucleus | 28.13 | 22.0 |
| CDX96046 | Canola | nucleus | 13.04 | 21.89 |
| CDY09391 | Canola | nucleus | 31.71 | 21.87 |
| OQU89911 | Sorghum | nucleus, plastid | 29.67 | 21.76 |
| CDY17614 | Canola | nucleus, plastid | 28.39 | 21.64 |
| CDY15814 | Canola | nucleus | 26.09 | 21.56 |
| GSMUA_Achr11P... | Banana | nucleus | 31.2 | 21.55 |
| CDY03080 | Canola | nucleus, plastid | 28.13 | 21.32 |
| TraesCS6B01G271000.1 | Wheat | nucleus | 30.43 | 20.66 |
| CDX81372 | Canola | nucleus | 25.83 | 20.65 |
| Os08t0554400-02 | Rice | nucleus | 28.9 | 20.62 |
| KXG25416 | Sorghum | nucleus | 29.16 | 20.61 |
| CDY67009 | Canola | nucleus | 25.06 | 20.59 |
| TraesCS6A01G254500.1 | Wheat | nucleus | 30.43 | 20.59 |
| TraesCS6D01G235800.1 | Wheat | nucleus | 30.43 | 20.59 |
| GSMUA_Achr11P... | Banana | nucleus | 26.6 | 20.35 |
| CDX75732 | Canola | nucleus | 23.02 | 20.32 |
| CDY18188 | Canola | nucleus | 24.81 | 20.25 |
| CDX89862 | Canola | nucleus | 24.81 | 20.21 |
| CDX82515 | Canola | nucleus | 22.76 | 20.18 |
| CDY57128 | Canola | nucleus | 25.32 | 20.12 |
| CDY32514 | Canola | nucleus | 25.06 | 20.0 |
| EES11271 | Sorghum | nucleus | 30.43 | 19.87 |
| CDX94759 | Canola | nucleus | 23.53 | 19.83 |
| CDY22307 | Canola | nucleus | 23.53 | 19.83 |
| Zm00001d026113_P006 | Maize | nucleus | 30.18 | 19.7 |
| TraesCS2B01G421100.1 | Wheat | nucleus | 30.69 | 19.61 |
| Os02t0672100-01 | Rice | nucleus | 30.69 | 19.51 |
| Zm00001d017560_P001 | Maize | nucleus | 28.9 | 19.42 |
| Os04t0566400-02 | Rice | nucleus | 30.18 | 19.25 |
| Zm00001d031992_P001 | Maize | nucleus | 29.41 | 19.01 |
| CDX97521 | Canola | nucleus | 23.53 | 18.97 |
| CDY55238 | Canola | nucleus | 23.53 | 18.93 |
| CDY11241 | Canola | nucleus | 24.3 | 18.89 |
| KXG31026 | Sorghum | nucleus | 28.64 | 18.82 |
| CDX80854 | Canola | nucleus | 24.3 | 18.81 |
| Zm00001d002654_P003 | Maize | nucleus | 30.18 | 18.64 |
| CDY44344 | Canola | nucleus | 23.79 | 18.6 |
| CDY51742 | Canola | nucleus | 23.02 | 18.59 |
| CDY10404 | Canola | nucleus | 24.04 | 18.54 |
| CDX70328 | Canola | nucleus | 24.04 | 18.29 |
| TraesCS2D01G400300.2 | Wheat | nucleus | 30.43 | 17.98 |
| TraesCS2A01G403200.2 | Wheat | nucleus | 30.43 | 17.95 |
| CDX84974 | Canola | nucleus | 17.39 | 17.75 |
| CDY60366 | Canola | nucleus | 17.14 | 17.49 |
| Zm00001d006319_P001 | Maize | nucleus | 24.81 | 17.35 |
| CDY67587 | Canola | cytosol, nucleus | 9.97 | 17.33 |
| CDY04204 | Canola | nucleus | 15.86 | 17.27 |
| KXG36163 | Sorghum | nucleus | 25.58 | 17.18 |
| CDY36123 | Canola | nucleus | 16.37 | 16.93 |
| CDY51986 | Canola | nucleus | 16.37 | 16.93 |
| CDY70938 | Canola | cytosol, nucleus | 11.51 | 16.48 |
| CDY09400 | Canola | nucleus | 17.14 | 15.3 |
| CDY60095 | Canola | nucleus | 17.14 | 15.16 |
| CDY17620 | Canola | nucleus | 17.14 | 15.09 |
| CDY04203 | Canola | plastid | 14.83 | 15.06 |
| CDY07400 | Canola | nucleus | 15.86 | 15.01 |
| CDY15800 | Canola | nucleus | 16.88 | 14.93 |
| CDY04102 | Canola | nucleus | 16.88 | 14.7 |
| CDY63960 | Canola | nucleus | 16.88 | 14.63 |
Protein Annotations
| EnsemblPlants:CDY68983 | EnsemblPlantsGene:GSBRNA2T00081963001 | Gene3D:3.30.160.60 | GO:A0A078JN81 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF50 |
| PFAM:PF12874 | PFscan:PS50157 | ProteinID:CDY68983 | ProteinID:CDY68983.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EF145B | UniProt:A0A078JN81 | MapMan:15.5.15 | : |
Description
BnaCnng61280DBnaCnng61280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JN81]
Coordinates
chrLK038403:-:2713..4355
Molecular Weight (calculated)
42466.1 Da
IEP (calculated)
10.169
GRAVY (calculated)
-0.865
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MATNRFLCEV CNRGFNREQN LQLHGRVHNL SWKPKQKSEK EARRKKHYYR KQGEKQWKCD KCPKSYALQS DWKTHSKICG LKVHRCDCGT TFSRRENYNA
101: HKALCDALNQ ESGRNPTGSI TNMAAAAGGS GGRHDFYGGA DSALGRVQDF YARAASALGK QDFYGGAASA LGRHGFYGGA ASALSHNQFG NKSNTGYNLN
201: HSSSNKFEGF VPHPTNPNPG PTNFPMQCPS NQASLAHNDQ SLRSQHDLIS LGARINNNNN NTNHGYFQNN TKTSNQTFFA HGADINDPSA LPRGLTPSSS
301: SGVVVNGFGD NDKGNLQGRM NSLAVTTNQQ GWSASNIFGP HFGNNLSMGA SDVLTLGVNG GSVRKGRGGR NPAPLDTEMK FSYSNRPFGN P
101: HKALCDALNQ ESGRNPTGSI TNMAAAAGGS GGRHDFYGGA DSALGRVQDF YARAASALGK QDFYGGAASA LGRHGFYGGA ASALSHNQFG NKSNTGYNLN
201: HSSSNKFEGF VPHPTNPNPG PTNFPMQCPS NQASLAHNDQ SLRSQHDLIS LGARINNNNN NTNHGYFQNN TKTSNQTFFA HGADINDPSA LPRGLTPSSS
301: SGVVVNGFGD NDKGNLQGRM NSLAVTTNQQ GWSASNIFGP HFGNNLSMGA SDVLTLGVNG GSVRKGRGGR NPAPLDTEMK FSYSNRPFGN P
001: MSSSYNTIAL SSTPTFLLSS AAAGPGPNNF NRQEAAMTMV QQQPTSSVAP PPKKRRNQPG NPNPDAEVIA LSPKTIMATN RFLCEVCNKG FQREQNLQLH
101: RRGHNLPWKL KQKSNKEVRR KVYLCPEPSC VHHDPARALG DLTGIKKHYY RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTKEYRCDCG TIFSRRDSYI
201: THRAFCDALI QESARNPTVS FTAMAAGGGG GARHGFYGGA SSALSHNHFG NNPNSGFTPL AAAGYNLNRS SSDKFEDFVP QATNPNPGPT NFLMQCSPNQ
301: GLLAQNNQSL MNHHGLISLG DNNNNNHNFF NLAYFQDTKN SDQTGVPSLF TNGADNNGPS ALLRGLTSSS SSSVVVNDFG DCDHGNLQGL MNSLAATTDQ
401: QGRSPSLFDL HFANNLSMGG SDRLTLDFLG VNGGIVSTVN GRGGRSGGPP LDAEMKFSHP NHPYGKA
101: RRGHNLPWKL KQKSNKEVRR KVYLCPEPSC VHHDPARALG DLTGIKKHYY RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTKEYRCDCG TIFSRRDSYI
201: THRAFCDALI QESARNPTVS FTAMAAGGGG GARHGFYGGA SSALSHNHFG NNPNSGFTPL AAAGYNLNRS SSDKFEDFVP QATNPNPGPT NFLMQCSPNQ
301: GLLAQNNQSL MNHHGLISLG DNNNNNHNFF NLAYFQDTKN SDQTGVPSLF TNGADNNGPS ALLRGLTSSS SSSVVVNDFG DCDHGNLQGL MNSLAATTDQ
401: QGRSPSLFDL HFANNLSMGG SDRLTLDFLG VNGGIVSTVN GRGGRSGGPP LDAEMKFSHP NHPYGKA
Arabidopsis Description
C2H2-like zinc finger protein [Source:TAIR;Acc:AT1G14580]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.