Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04118 | Canola | nucleus | 21.9 | 89.08 |
| CDY09390 | Canola | nucleus | 21.49 | 87.39 |
| OQU89911 | Sorghum | nucleus, plastid | 86.57 | 78.61 |
| CDY53540 | Canola | nucleus | 24.17 | 60.31 |
| CDY04117 | Canola | nucleus | 25.83 | 58.41 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 39.26 | 52.2 |
| KRG89168 | Soybean | nucleus, plastid | 36.98 | 51.44 |
| Zm00001d039254_P001 | Maize | nucleus | 34.09 | 46.61 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 43.39 | 44.4 |
| KRH49489 | Soybean | nucleus, plastid | 44.83 | 40.71 |
| KRH49485 | Soybean | nucleus | 45.66 | 40.7 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 47.93 | 40.56 |
| Zm00001d006319_P001 | Maize | nucleus | 46.69 | 40.43 |
| KRG89167 | Soybean | nucleus, plastid | 45.25 | 39.89 |
| KRG91985 | Soybean | nucleus | 45.25 | 39.11 |
| KRG90705 | Soybean | nucleus | 45.45 | 38.8 |
| KRH34792 | Soybean | nucleus | 44.01 | 38.38 |
| KRH36039 | Soybean | nucleus | 44.63 | 37.83 |
| Solyc04g008500.2.1 | Tomato | nucleus | 40.29 | 37.72 |
| PGSC0003DMT400075837 | Potato | nucleus | 40.29 | 37.64 |
| CDY59418 | Canola | nucleus | 32.02 | 37.53 |
| Zm00001d031992_P001 | Maize | nucleus | 46.69 | 37.36 |
| Zm00001d008842_P001 | Maize | nucleus | 35.95 | 37.26 |
| Zm00001d009030_P002 | Maize | nucleus | 33.88 | 36.69 |
| CDY45271 | Canola | nucleus | 31.41 | 36.54 |
| Zm00001d039467_P001 | Maize | nucleus | 36.78 | 35.81 |
| GSMUA_Achr11P... | Banana | nucleus | 37.81 | 35.81 |
| GSMUA_Achr11P... | Banana | nucleus | 39.26 | 35.65 |
| Bra026204.1-P | Field mustard | nucleus, plastid | 33.06 | 35.56 |
| CDY17440 | Canola | nucleus | 34.92 | 35.36 |
| VIT_01s0010g02090.t01 | Wine grape | extracellular, vacuole | 48.14 | 35.25 |
| Zm00001d017560_P001 | Maize | nucleus | 42.36 | 35.22 |
| CDY45270 | Canola | nucleus | 32.64 | 35.11 |
| Zm00001d044261_P001 | Maize | nucleus | 33.68 | 33.96 |
| Zm00001d032922_P001 | Maize | nucleus | 30.58 | 33.95 |
| Zm00001d011223_P002 | Maize | nucleus | 32.64 | 33.76 |
| Zm00001d026113_P006 | Maize | nucleus | 41.74 | 33.72 |
| Bra026203.1-P | Field mustard | nucleus, plastid | 32.02 | 33.41 |
| AT2G02080.3 | Thale cress | nucleus, plastid | 35.54 | 33.33 |
| CDX81653 | Canola | nucleus | 32.02 | 33.19 |
| Bra026819.1-P | Field mustard | nucleus | 32.02 | 33.19 |
| CDY15814 | Canola | nucleus | 32.23 | 32.98 |
| CDY03081 | Canola | nucleus | 35.54 | 32.82 |
| CDY17614 | Canola | nucleus, plastid | 34.71 | 32.75 |
| Bra026616.1-P | Field mustard | nucleus | 34.5 | 32.68 |
| CDY17615 | Canola | nucleus | 35.54 | 32.64 |
| CDY03080 | Canola | nucleus, plastid | 34.71 | 32.56 |
| Bra024833.1-P | Field mustard | plastid | 34.5 | 32.55 |
| AT1G14580.3 | Thale cress | nucleus | 32.23 | 32.43 |
| Zm00001d002654_P003 | Maize | nucleus | 42.36 | 32.39 |
| Zm00001d028139_P001 | Maize | nucleus | 35.74 | 32.1 |
| Bra023223.1-P | Field mustard | plastid | 31.2 | 31.46 |
| CDY09391 | Canola | nucleus | 36.78 | 31.39 |
| Bra024834.1-P | Field mustard | nucleus, plastid | 35.54 | 31.16 |
| Zm00001d016632_P001 | Maize | nucleus | 32.44 | 30.91 |
| CDY15811 | Canola | nucleus | 36.16 | 30.81 |
| Zm00001d042202_P001 | Maize | nucleus | 33.06 | 30.48 |
| Bra026617.1-P | Field mustard | nucleus | 36.98 | 30.34 |
| CDY68983 | Canola | nucleus | 24.17 | 29.92 |
| Bra040974.1-P | Field mustard | nucleus, plastid | 36.16 | 29.91 |
| AT2G02070.2 | Thale cress | nucleus | 36.78 | 29.57 |
| CDY12268 | Canola | nucleus | 26.86 | 29.15 |
| Zm00001d005871_P002 | Maize | nucleus | 23.14 | 25.4 |
| Zm00001d028361_P001 | Maize | nucleus, plastid | 22.31 | 23.89 |
| Zm00001d047976_P001 | Maize | nucleus, plastid | 22.11 | 23.88 |
| Zm00001d020683_P001 | Maize | nucleus | 22.93 | 22.33 |
| Zm00001d006682_P001 | Maize | nucleus | 33.88 | 22.1 |
| Zm00001d031759_P001 | Maize | nucleus | 22.93 | 21.43 |
| Zm00001d021932_P001 | Maize | nucleus | 32.64 | 19.39 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | UniProt:A0A1D6IAP1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0046872 | InterPro:IPR013087 | ProteinID:ONM57041.1 | PFAM:PF12171 | ScanProsite:PS00028 | PFscan:PS50157 |
| PANTHER:PTHR10593 | PANTHER:PTHR10593:SF66 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0008434677 | EnsemblPlantsGene:Zm00001d021403 |
| EnsemblPlants:Zm00001d021403_P001 | EnsemblPlants:Zm00001d021403_T001 | InterPro:Znf_C2H2_jaz | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
indeterminate1 domain7 indeterminate1 domain7
Coordinates
chr7:+:151211055..151215873
Molecular Weight (calculated)
50619.2 Da
IEP (calculated)
8.888
GRAVY (calculated)
-0.449
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MHADPDAEVI ALSPRTLLAT NRFVCEVCNK GFQREQNLQL HRRGHNLPWK LKQKNPREAR RRVYLCPEPT CVHHDPSRAL GDLTGIKKHY CRKHGEKKWK
101: CDKCSKRYAV QSDWKAHSKT CGTREYRCDC GTLFSRRDSF ITHRAFCDAL ARESAQMPPL GAGLYVGPGS MSLGLSQIHG FADQAQSSSA AAAPQFDHIM
201: PSSSGSSSMF RSQASASSPS YFLGGSAPPA AAQDFSEDGS QGSQGPLLHG KAHFHGLMMQ LPEQQHQPGS SNAAVGANGS NILNLGFFSA GNSGGTSGSL
301: QDARIAIQDQ FNLSGSGSGS AEHGNNVMVA SIGSHLGRGF PSLYSSSPSA GMAQNSATAL LMKAAQMGST TSSTTHNNHN GPTTTSTLLR ATGFSGATGS
401: GQLGTTGGRA AAGEEGAASH EAHFHELIMN SLAGGGFSGT AGFGGGVDDG KLSTRDFLGV GRGAATMAPP GLHMGALDPA QQMK
101: CDKCSKRYAV QSDWKAHSKT CGTREYRCDC GTLFSRRDSF ITHRAFCDAL ARESAQMPPL GAGLYVGPGS MSLGLSQIHG FADQAQSSSA AAAPQFDHIM
201: PSSSGSSSMF RSQASASSPS YFLGGSAPPA AAQDFSEDGS QGSQGPLLHG KAHFHGLMMQ LPEQQHQPGS SNAAVGANGS NILNLGFFSA GNSGGTSGSL
301: QDARIAIQDQ FNLSGSGSGS AEHGNNVMVA SIGSHLGRGF PSLYSSSPSA GMAQNSATAL LMKAAQMGST TSSTTHNNHN GPTTTSTLLR ATGFSGATGS
401: GQLGTTGGRA AAGEEGAASH EAHFHELIMN SLAGGGFSGT AGFGGGVDDG KLSTRDFLGV GRGAATMAPP GLHMGALDPA QQMK
001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
Arabidopsis Description
IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.