Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04118 | Canola | nucleus | 24.9 | 100.0 |
| CDY09390 | Canola | nucleus | 24.48 | 98.32 |
| AT2G02080.3 | Thale cress | nucleus, plastid | 86.61 | 80.23 |
| CDY15814 | Canola | nucleus | 79.29 | 80.13 |
| CDY17614 | Canola | nucleus, plastid | 85.98 | 80.12 |
| CDY03080 | Canola | nucleus, plastid | 85.36 | 79.07 |
| CDY53540 | Canola | nucleus | 29.08 | 71.65 |
| CDY04117 | Canola | nucleus | 30.75 | 68.69 |
| CDY59418 | Canola | nucleus | 59.2 | 68.52 |
| CDY14910 | Canola | nucleus | 19.04 | 68.42 |
| CDX81653 | Canola | nucleus | 62.34 | 63.81 |
| CDY37489 | Canola | nucleus | 24.06 | 62.5 |
| CDY72283 | Canola | nucleus | 24.48 | 61.9 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 37.45 | 49.18 |
| CDY70142 | Canola | nucleus | 18.41 | 48.35 |
| CDY03081 | Canola | nucleus | 51.05 | 46.56 |
| CDY17615 | Canola | nucleus | 50.63 | 45.92 |
| KRG89168 | Soybean | nucleus, plastid | 32.85 | 45.11 |
| CDY09391 | Canola | nucleus | 52.51 | 44.27 |
| CDY15811 | Canola | nucleus | 51.88 | 43.66 |
| GSMUA_Achr3P13990_001 | Banana | nucleus | 37.24 | 41.78 |
| CDX97281 | Canola | nucleus, plastid | 32.22 | 40.0 |
| CDX96046 | Canola | nucleus | 19.46 | 39.91 |
| GSMUA_Achr5P11770_001 | Banana | nucleus, plastid | 32.85 | 39.45 |
| CDX94759 | Canola | nucleus | 37.87 | 39.01 |
| CDY22307 | Canola | nucleus | 37.87 | 39.01 |
| GSMUA_Achr1P17940_001 | Banana | nucleus | 38.08 | 38.97 |
| CDY45271 | Canola | nucleus | 33.68 | 38.7 |
| GSMUA_Achr10P... | Banana | nucleus | 38.7 | 38.62 |
| CDY24490 | Canola | nucleus | 35.15 | 38.62 |
| GSMUA_Achr1P07110_001 | Banana | nucleus | 39.12 | 38.48 |
| CDY18188 | Canola | nucleus | 38.49 | 38.41 |
| CDX77936 | Canola | nucleus | 34.73 | 38.07 |
| CDX89862 | Canola | nucleus | 38.08 | 37.92 |
| CDX91304 | Canola | nucleus, plastid | 32.01 | 37.87 |
| CDX75732 | Canola | nucleus | 34.94 | 37.7 |
| CDX82515 | Canola | nucleus | 34.73 | 37.64 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 37.24 | 37.63 |
| GSMUA_Achr9P23870_001 | Banana | nucleus | 34.1 | 37.56 |
| GSMUA_Achr4P11810_001 | Banana | mitochondrion, nucleus | 38.49 | 37.55 |
| CDY32514 | Canola | nucleus | 38.28 | 37.35 |
| CDY45270 | Canola | nucleus | 35.15 | 37.33 |
| CDX86010 | Canola | nucleus | 34.31 | 36.61 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 37.45 | 36.61 |
| CDY11241 | Canola | nucleus | 38.28 | 36.38 |
| Os09t0555700-02 | Rice | nucleus | 40.59 | 36.26 |
| KRH49489 | Soybean | nucleus, plastid | 39.96 | 35.83 |
| CDY53836 | Canola | nucleus | 33.89 | 35.76 |
| CDY44344 | Canola | nucleus | 37.24 | 35.6 |
| KRH49485 | Soybean | nucleus | 40.38 | 35.54 |
| CDX80854 | Canola | nucleus | 37.45 | 35.45 |
| CDY67009 | Canola | nucleus | 35.15 | 35.29 |
| CDY55238 | Canola | nucleus | 35.77 | 35.19 |
| PGSC0003DMT400075837 | Potato | nucleus | 38.08 | 35.14 |
| CDY51742 | Canola | nucleus | 35.36 | 34.92 |
| Zm00001d021403_P001 | Maize | nucleus | 35.36 | 34.92 |
| CDY10404 | Canola | nucleus | 37.03 | 34.91 |
| Os08t0554400-02 | Rice | nucleus | 39.96 | 34.85 |
| KRG90705 | Soybean | nucleus | 41.21 | 34.74 |
| CDX97521 | Canola | nucleus | 35.15 | 34.64 |
| TraesCS5B01G358600.1 | Wheat | nucleus, plastid | 39.54 | 34.62 |
| GSMUA_Achr4P05240_001 | Banana | nucleus | 36.19 | 34.6 |
| TraesCS5D01G364900.1 | Wheat | nucleus, plastid | 39.54 | 34.55 |
| TraesCS5A01G356100.1 | Wheat | nucleus, plastid | 39.12 | 34.31 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 41.0 | 34.27 |
| KRG89167 | Soybean | nucleus, plastid | 39.33 | 34.24 |
| Solyc04g008500.2.1 | Tomato | nucleus | 37.03 | 34.24 |
| GSMUA_Achr11P... | Banana | nucleus | 38.08 | 34.15 |
| KRH34792 | Soybean | nucleus | 39.54 | 34.05 |
| CDX70328 | Canola | nucleus | 36.61 | 34.05 |
| KRH36039 | Soybean | nucleus | 40.59 | 33.98 |
| KRG91985 | Soybean | nucleus | 39.75 | 33.93 |
| GSMUA_Achr11P... | Banana | nucleus | 36.19 | 33.86 |
| KXG25416 | Sorghum | nucleus | 39.12 | 33.82 |
| OQU89911 | Sorghum | nucleus, plastid | 37.66 | 33.77 |
| GSMUA_Achr1P02080_001 | Banana | nucleus | 38.28 | 33.46 |
| CDX81372 | Canola | nucleus | 34.1 | 33.33 |
| CDY57128 | Canola | nucleus | 34.31 | 33.33 |
| TraesCS2B01G421100.1 | Wheat | nucleus | 41.63 | 32.52 |
| Zm00001d017560_P001 | Maize | nucleus | 39.54 | 32.47 |
| EES11271 | Sorghum | nucleus | 40.59 | 32.39 |
| TraesCS6B01G271000.1 | Wheat | nucleus | 38.7 | 32.12 |
| KXG31026 | Sorghum | nucleus | 39.96 | 32.1 |
| TraesCS6A01G254500.1 | Wheat | nucleus | 38.7 | 32.01 |
| TraesCS6D01G235800.1 | Wheat | nucleus | 38.7 | 32.01 |
| Zm00001d026113_P006 | Maize | nucleus | 39.96 | 31.89 |
| Os02t0672100-01 | Rice | nucleus | 40.8 | 31.71 |
| Os04t0566400-02 | Rice | nucleus | 40.59 | 31.65 |
| Zm00001d031992_P001 | Maize | nucleus | 39.33 | 31.07 |
| Zm00001d002654_P003 | Maize | nucleus | 40.17 | 30.33 |
| CDY12268 | Canola | nucleus | 28.24 | 30.27 |
| TraesCS2D01G400300.2 | Wheat | nucleus | 41.63 | 30.06 |
| TraesCS2A01G403200.2 | Wheat | nucleus | 41.63 | 30.02 |
| GSMUA_Achr11P... | Banana | nucleus | 35.15 | 29.68 |
| KXG36163 | Sorghum | nucleus | 34.94 | 28.69 |
| CDY68983 | Canola | nucleus | 23.22 | 28.39 |
| CDY04204 | Canola | nucleus | 20.92 | 27.86 |
| CDY36123 | Canola | nucleus | 21.97 | 27.78 |
| CDY51986 | Canola | nucleus | 21.97 | 27.78 |
| Zm00001d006319_P001 | Maize | nucleus | 32.43 | 27.73 |
| CDX84974 | Canola | nucleus | 22.18 | 27.68 |
| CDY70938 | Canola | cytosol, nucleus | 15.69 | 27.47 |
| CDY60366 | Canola | nucleus | 21.97 | 27.42 |
| CDY04203 | Canola | plastid | 20.92 | 25.97 |
| CDY07400 | Canola | nucleus | 21.34 | 24.7 |
| CDY09400 | Canola | nucleus | 22.59 | 24.66 |
| CDY17620 | Canola | nucleus | 22.8 | 24.55 |
| CDY15800 | Canola | nucleus | 22.59 | 24.43 |
| CDY60095 | Canola | nucleus | 22.59 | 24.43 |
| CDY63960 | Canola | nucleus | 22.8 | 24.17 |
| CDY04102 | Canola | nucleus | 22.59 | 24.05 |
| CDY67587 | Canola | cytosol, nucleus | 11.3 | 24.0 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:A0A078FSD5 | UniProt:A0A078FSD5 | EnsemblPlants:CDY17440 | ProteinID:CDY17440 |
| ProteinID:CDY17440.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00095586001 | InterPro:IPR013087 |
| PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF66 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0004EF0EFC | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
BnaC09g20970DBnaC09g20970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSD5]
Coordinates
chrLK032073:+:331240..334917
Molecular Weight (calculated)
51825.4 Da
IEP (calculated)
9.085
GRAVY (calculated)
-0.638
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSYNASV VPSSSSSAQP FFLTGSGLHH PRNEETNPET QANPDAEVVA LSPKTIMATN RFICDVCKKG FQREQNLQLH RRGHNLPWKL KQKSTKEVKR
101: KVYLCPEPTC VHHDPSRALG DLTGIKKHYY RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTKEYRCDCG TIFSRRDSYI THRAFCDALI QETARNPTLS
201: FTSMEAASSG AGSGGLYGRL DGGRTLSHHH LSGHPNSGFS PLAGYNLNIA SSENSRHFVP QTSNPNFLIQ SSQGMLTVPN NNDQSFMNHQ GLNQFDPVNN
301: INSKSSTNNS FFNLGFFQEN IKNSETSLPS LYSSDVLVHH PEESLNVGSN VSATALLQKA TQMGSITSND PSALLRGLAS SSSNDFGGGQ IMGNDNNGNL
401: QGLMNSLVAV NGGGAGGSGG NIFDVHFGNN GNMSGSDKLT LDFLGVGGMV RNVNRGRGRG GDVGELKFSE QNHPFGRS
101: KVYLCPEPTC VHHDPSRALG DLTGIKKHYY RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTKEYRCDCG TIFSRRDSYI THRAFCDALI QETARNPTLS
201: FTSMEAASSG AGSGGLYGRL DGGRTLSHHH LSGHPNSGFS PLAGYNLNIA SSENSRHFVP QTSNPNFLIQ SSQGMLTVPN NNDQSFMNHQ GLNQFDPVNN
301: INSKSSTNNS FFNLGFFQEN IKNSETSLPS LYSSDVLVHH PEESLNVGSN VSATALLQKA TQMGSITSND PSALLRGLAS SSSNDFGGGQ IMGNDNNGNL
401: QGLMNSLVAV NGGGAGGSGG NIFDVHFGNN GNMSGSDKLT LDFLGVGGMV RNVNRGRGRG GDVGELKFSE QNHPFGRS
001: MSSSSYNTSV IPSSSSSAQP FFITSSGTGD NDFNRKDTFM SMIQQPNSSA PPPKKRRNQP GNPNPDAEVV ALSPKTLMAT NRFICDVCNK GFQREQNLQL
101: HRRGHNLPWK LKQKSTKEVK RKVYLCPEPT CVHHDPSRAL GDLTGIKKHY YRKHGEKKWK CEKCSKRYAV QSDWKAHSKT CGTKEYRCDC GTIFSRRDSY
201: ITHRAFCDAL IQETARNPTV SFTSMTAASS GVGSGGIYGR LGGGSALSHH HLSDHPNFGF NPLVGYNLNI ASSDNRRDFI PQSSNPNFLI QSASSQGMLN
301: TTPNNNNQSF MNQHGLIQFD PVDNINLKSS GTNNSFFNLG FFQENTKNSE TSLPSLYSTD VLVHHREENL NAGSNVSATA LLQKATQMGS VTSNDPSALF
401: RGLASSSNSS SVIANHFGGG RIMENDNNGN LQGLMNSLAA VNGGGGSGGS IFDVQFGDNG NMSGSDKLTL DFLGVGGMVR NVNRGGGGGG RGSARGGVSL
501: DGEAKFPEQN YPFGRG
101: HRRGHNLPWK LKQKSTKEVK RKVYLCPEPT CVHHDPSRAL GDLTGIKKHY YRKHGEKKWK CEKCSKRYAV QSDWKAHSKT CGTKEYRCDC GTIFSRRDSY
201: ITHRAFCDAL IQETARNPTV SFTSMTAASS GVGSGGIYGR LGGGSALSHH HLSDHPNFGF NPLVGYNLNI ASSDNRRDFI PQSSNPNFLI QSASSQGMLN
301: TTPNNNNQSF MNQHGLIQFD PVDNINLKSS GTNNSFFNLG FFQENTKNSE TSLPSLYSTD VLVHHREENL NAGSNVSATA LLQKATQMGS VTSNDPSALF
401: RGLASSSNSS SVIANHFGGG RIMENDNNGN LQGLMNSLAA VNGGGGSGGS IFDVQFGDNG NMSGSDKLTL DFLGVGGMVR NVNRGGGGGG RGSARGGVSL
501: DGEAKFPEQN YPFGRG
Arabidopsis Description
IDD4Protein indeterminate-domain 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GYC1]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.