Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11271 | Sorghum | nucleus | 89.82 | 89.82 |
| CDY04118 | Canola | nucleus | 17.03 | 85.71 |
| CDY09390 | Canola | nucleus | 16.86 | 84.87 |
| Zm00001d002654_P003 | Maize | nucleus | 87.65 | 82.94 |
| TraesCS2B01G421100.1 | Wheat | nucleus | 80.63 | 78.92 |
| Os04t0566400-02 | Rice | nucleus | 77.13 | 75.37 |
| TraesCS2D01G400300.2 | Wheat | nucleus | 80.47 | 72.81 |
| TraesCS2A01G403200.2 | Wheat | nucleus | 80.13 | 72.4 |
| Os02t0672100-01 | Rice | nucleus | 68.95 | 67.15 |
| Zm00001d017560_P001 | Maize | nucleus | 64.27 | 66.15 |
| CDY53540 | Canola | nucleus | 21.04 | 64.95 |
| CDY04117 | Canola | nucleus | 23.04 | 64.49 |
| KRG89168 | Soybean | nucleus, plastid | 32.55 | 56.03 |
| Zm00001d039254_P001 | Maize | nucleus | 28.71 | 48.59 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 41.4 | 43.36 |
| KRH49489 | Soybean | nucleus, plastid | 38.23 | 42.96 |
| KRG90705 | Soybean | nucleus | 40.57 | 42.86 |
| KRH49485 | Soybean | nucleus | 38.06 | 41.99 |
| KRG89167 | Soybean | nucleus, plastid | 38.4 | 41.89 |
| Zm00001d021403_P001 | Maize | nucleus | 33.72 | 41.74 |
| GSMUA_Achr10P... | Banana | nucleus | 33.22 | 41.54 |
| KRH36039 | Soybean | nucleus | 39.57 | 41.51 |
| CDY03081 | Canola | nucleus | 36.23 | 41.41 |
| CDY59418 | Canola | nucleus | 28.55 | 41.4 |
| Zm00001d031992_P001 | Maize | nucleus | 41.74 | 41.32 |
| CDY17615 | Canola | nucleus | 36.23 | 41.18 |
| Zm00001d008842_P001 | Maize | nucleus | 32.05 | 41.11 |
| Zm00001d011223_P002 | Maize | nucleus | 32.05 | 41.03 |
| CDY45271 | Canola | nucleus | 28.38 | 40.87 |
| Zm00001d039467_P001 | Maize | nucleus | 33.72 | 40.64 |
| Zm00001d009030_P002 | Maize | nucleus | 30.05 | 40.27 |
| CDY17440 | Canola | nucleus | 31.89 | 39.96 |
| CDY15814 | Canola | nucleus | 31.39 | 39.75 |
| Zm00001d044261_P001 | Maize | nucleus | 31.72 | 39.58 |
| PGSC0003DMT400075837 | Potato | nucleus | 34.06 | 39.38 |
| Bra026204.1-P | Field mustard | nucleus, plastid | 29.55 | 39.33 |
| CDY45270 | Canola | nucleus | 29.55 | 39.33 |
| Bra024834.1-P | Field mustard | nucleus, plastid | 36.23 | 39.31 |
| Bra026819.1-P | Field mustard | nucleus | 30.38 | 38.97 |
| AT2G02080.3 | Thale cress | nucleus, plastid | 33.56 | 38.95 |
| Bra026616.1-P | Field mustard | nucleus | 33.22 | 38.94 |
| KRH34792 | Soybean | nucleus | 36.06 | 38.92 |
| CDX81653 | Canola | nucleus | 30.22 | 38.76 |
| Solyc04g008500.2.1 | Tomato | nucleus | 33.39 | 38.68 |
| KRG91985 | Soybean | nucleus | 36.06 | 38.57 |
| CDY15811 | Canola | nucleus | 36.39 | 38.38 |
| CDY09391 | Canola | nucleus | 36.23 | 38.27 |
| CDY17614 | Canola | nucleus, plastid | 32.72 | 38.21 |
| Bra024833.1-P | Field mustard | plastid | 32.55 | 38.01 |
| GSMUA_Achr11P... | Banana | nucleus | 35.39 | 37.46 |
| AT1G14580.3 | Thale cress | nucleus | 30.05 | 37.42 |
| Bra040974.1-P | Field mustard | nucleus, plastid | 36.39 | 37.27 |
| CDY03080 | Canola | nucleus, plastid | 32.05 | 37.21 |
| Bra026617.1-P | Field mustard | nucleus | 36.23 | 36.78 |
| VIT_01s0010g02090.t01 | Wine grape | extracellular, vacuole | 40.23 | 36.46 |
| Bra026203.1-P | Field mustard | nucleus, plastid | 28.21 | 36.42 |
| Zm00001d032922_P001 | Maize | nucleus | 26.38 | 36.24 |
| AT2G02070.2 | Thale cress | nucleus | 36.39 | 36.21 |
| Zm00001d028139_P001 | Maize | nucleus | 32.05 | 35.62 |
| Zm00001d016632_P001 | Maize | nucleus | 29.55 | 34.84 |
| Zm00001d006319_P001 | Maize | nucleus | 31.89 | 34.17 |
| Zm00001d042202_P001 | Maize | nucleus | 29.38 | 33.52 |
| Bra023223.1-P | Field mustard | plastid | 26.54 | 33.12 |
| CDY12268 | Canola | nucleus | 23.54 | 31.61 |
| CDY68983 | Canola | nucleus | 19.7 | 30.18 |
| Zm00001d005871_P002 | Maize | nucleus | 20.87 | 28.34 |
| Zm00001d028361_P001 | Maize | nucleus, plastid | 20.53 | 27.21 |
| Zm00001d047976_P001 | Maize | nucleus, plastid | 20.2 | 27.01 |
| Zm00001d020683_P001 | Maize | nucleus | 21.2 | 25.55 |
| Zm00001d031759_P001 | Maize | nucleus | 21.37 | 24.71 |
| Zm00001d006682_P001 | Maize | nucleus | 29.38 | 23.72 |
| Zm00001d021932_P001 | Maize | nucleus | 29.88 | 21.96 |
Protein Annotations
| EntrezGene:100304401 | MapMan:15.5.15 | Gene3D:3.30.160.60 | ProteinID:AQK45576.1 | ProteinID:AQK45577.1 | ProteinID:AQK45579.1 |
| ProteinID:AQK45581.1 | ProteinID:AQK45582.1 | ProteinID:AQK45583.1 | ProteinID:AQK45584.1 | ProteinID:AQK45586.1 | ProteinID:AQK45587.1 |
| ProteinID:AQK45588.1 | ProteinID:AQK45589.1 | EMBL:BT061050 | UniProt:C0HFE4 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | PFAM:PF00096 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF63 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0001948616 | EnsemblPlantsGene:Zm00001d026113 | EnsemblPlants:Zm00001d026113_P006 |
| EnsemblPlants:Zm00001d026113_T006 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : |
Description
naked endosperm2 naked endosperm2
Coordinates
chr10:-:138719554..138725329
Molecular Weight (calculated)
62393.2 Da
IEP (calculated)
8.896
GRAVY (calculated)
-0.484
Length
599 amino acids
Sequence
(BLAST)
(BLAST)
001: MMASNSPAAA FFGVRDGDQQ DHQIKPLISP QQQQQLAAAL PSVASGQGAP TAAAQPPPKK KRTMPDPDAE VIALSPKTLM ATNRFVCEVC SKGFQREQNL
101: QLHRRGHNLP WKLKQKDPLQ AQRRRVYLCP EPTCAHHDPA RALGDLTGIK KHFSRKHGEK KWKCDKCSKR YAVQSDWKAH SKICGTREYR CDCGTLFSRR
201: DSFITHRAFC DALAQESARL PPTSSLSNLT SHLYGAATNA GNMALSLSQV GSHLTSTLQD GHHHRPSPEL LRLGATAGGG GGSSIAARLD HLLSPNGASA
301: FRPAQPPSFF HNAGASVGQD FGDDAGNGPH SFLQLQANKP FHGLLMQLPD LQGNGAGGPG ASGGPSSLFS LGFFANNGNS SSGSSHEHAS QGLMNSDQFS
401: GGGSEAQAAA GIFGGNFVSA GGDQVPPPGL YRDQASMLPQ MSATALLQKA AQMGATTSAN GASAASMFRG FAGSSPQHVR PATPHMEQSD ANLNDLMNSL
501: AGGGGLGAGG GMFGGGSNGA GHAGMFDPRQ LCDMAEREGK FGFGQGGGGD ITRDFLGVGG GGLVRGISTP RGDHQSSSDM SSMEAELKSA SSFNGGRMP
101: QLHRRGHNLP WKLKQKDPLQ AQRRRVYLCP EPTCAHHDPA RALGDLTGIK KHFSRKHGEK KWKCDKCSKR YAVQSDWKAH SKICGTREYR CDCGTLFSRR
201: DSFITHRAFC DALAQESARL PPTSSLSNLT SHLYGAATNA GNMALSLSQV GSHLTSTLQD GHHHRPSPEL LRLGATAGGG GGSSIAARLD HLLSPNGASA
301: FRPAQPPSFF HNAGASVGQD FGDDAGNGPH SFLQLQANKP FHGLLMQLPD LQGNGAGGPG ASGGPSSLFS LGFFANNGNS SSGSSHEHAS QGLMNSDQFS
401: GGGSEAQAAA GIFGGNFVSA GGDQVPPPGL YRDQASMLPQ MSATALLQKA AQMGATTSAN GASAASMFRG FAGSSPQHVR PATPHMEQSD ANLNDLMNSL
501: AGGGGLGAGG GMFGGGSNGA GHAGMFDPRQ LCDMAEREGK FGFGQGGGGD ITRDFLGVGG GGLVRGISTP RGDHQSSSDM SSMEAELKSA SSFNGGRMP
001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
Arabidopsis Description
IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.