Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95332 | Sorghum | nucleus | 88.68 | 91.05 |
| TraesCS4A01G041400.1 | Wheat | nucleus | 68.09 | 75.36 |
| TraesCS4B01G262400.1 | Wheat | nucleus | 72.73 | 74.24 |
| TraesCS4D01G262500.1 | Wheat | nucleus | 71.61 | 73.38 |
| Os03t0197800-00 | Rice | nucleus | 74.58 | 72.83 |
| HORVU4Hr1G070950.8 | Barley | nucleus | 71.43 | 71.83 |
| Zm00001d039254_P001 | Maize | nucleus | 33.21 | 50.56 |
| VIT_04s0023g01430.t01 | Wine grape | nucleus | 47.12 | 50.2 |
| KRH76829 | Soybean | nucleus | 47.31 | 49.32 |
| Bra036098.1-P | Field mustard | nucleus, plastid | 39.33 | 48.62 |
| CDX77936 | Canola | nucleus | 39.33 | 48.62 |
| CDY24490 | Canola | nucleus | 38.96 | 48.28 |
| AT3G50700.1 | Thale cress | nucleus | 40.45 | 48.23 |
| KRH08298 | Soybean | nucleus | 44.16 | 46.58 |
| KRH69941 | Soybean | nucleus, plastid | 44.9 | 46.1 |
| KRH69942 | Soybean | nucleus | 44.9 | 46.1 |
| CDY67009 | Canola | nucleus | 40.63 | 46.01 |
| AT5G66730.1 | Thale cress | nucleus | 42.49 | 45.8 |
| GSMUA_Achr7P25960_001 | Banana | nucleus | 50.09 | 45.61 |
| CDX81372 | Canola | nucleus | 41.19 | 45.4 |
| Bra037151.1-P | Field mustard | nucleus | 41.0 | 44.92 |
| PGSC0003DMT400033039 | Potato | nucleus, plastid | 43.6 | 44.76 |
| CDY57128 | Canola | nucleus | 40.63 | 44.51 |
| GSMUA_Achr4P14030_001 | Banana | nucleus | 44.53 | 44.2 |
| GSMUA_Achr3P29940_001 | Banana | nucleus | 46.75 | 43.37 |
| Zm00001d009030_P002 | Maize | nucleus | 34.88 | 42.06 |
| Zm00001d011223_P002 | Maize | nucleus | 35.99 | 41.45 |
| Zm00001d008842_P001 | Maize | nucleus | 35.06 | 40.47 |
| Zm00001d044261_P001 | Maize | nucleus | 35.44 | 39.79 |
| GSMUA_Achr4P07200_001 | Banana | nucleus | 39.7 | 39.63 |
| Zm00001d039467_P001 | Maize | nucleus | 35.81 | 38.83 |
| Zm00001d032922_P001 | Maize | nucleus | 29.13 | 36.01 |
| Zm00001d021403_P001 | Maize | nucleus | 32.1 | 35.74 |
| Solyc02g062940.2.1 | Tomato | nucleus | 43.04 | 35.37 |
| Zm00001d017560_P001 | Maize | nucleus | 37.48 | 34.71 |
| Zm00001d042202_P001 | Maize | nucleus | 33.02 | 33.9 |
| Zm00001d016632_P001 | Maize | nucleus | 31.54 | 33.46 |
| Zm00001d031992_P001 | Maize | nucleus | 36.18 | 32.23 |
| Zm00001d026113_P006 | Maize | nucleus | 35.62 | 32.05 |
| PGSC0003DMT400040064 | Potato | nucleus | 42.86 | 31.39 |
| Zm00001d002654_P003 | Maize | nucleus | 35.62 | 30.33 |
| Zm00001d006319_P001 | Maize | nucleus | 30.43 | 29.34 |
| Zm00001d006682_P001 | Maize | nucleus | 40.07 | 29.11 |
| Zm00001d005871_P002 | Maize | nucleus | 23.56 | 28.8 |
| Zm00001d028361_P001 | Maize | nucleus, plastid | 23.93 | 28.54 |
| Zm00001d047976_P001 | Maize | nucleus, plastid | 23.56 | 28.35 |
| Zm00001d021932_P001 | Maize | nucleus | 41.19 | 27.24 |
| Zm00001d020683_P001 | Maize | nucleus | 23.93 | 25.96 |
| Zm00001d031759_P001 | Maize | nucleus | 24.12 | 25.1 |
Protein Annotations
| EntrezGene:100279631 | MapMan:15.5.15 | Gene3D:3.30.160.60 | UniProt:B6SS63 | EMBL:BT054502 | EMBL:BT054618 |
| EMBL:EU955578 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | ProteinID:ONL94807.1 |
| PFAM:PF00096 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF20 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI000182AD8B | EnsemblPlantsGene:Zm00001d028139 | EnsemblPlants:Zm00001d028139_P001 | EnsemblPlants:Zm00001d028139_T001 | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
Protein indeterminate-domain 2
Coordinates
chr1:-:23959615..23962773
Molecular Weight (calculated)
56063.4 Da
IEP (calculated)
8.929
GRAVY (calculated)
-0.417
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVEATPTTA VSSSGVAAQL PPPGPPAKKK RALPGMPDPD AEVIALSPKT LLATNRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLRQRSG KEVRKRVYVC
101: PEPSCVHHDP SRALGDLTGI KKHFCRKHGE KKWKCDKCSK KYAVQSDWKA HVKTCGSREY RCDCGTLFSR RDSFITHRAF CDALAEESAK ARAEAPSAED
201: GSSAAAVVPP PAPPPAPAPL RQQPPPPAPH HAEPRNETDT NATEAVQFAP PPPPPPPPPP PPPPQLQVPV LSQASVSAAA NVGASSSSSS VAGTSQSLLG
301: GMFAPSSMAS APQYADLGGR PERAHPAKPP PLCLATDASS SIFSAAPAVT AERQQFAPPP PSPSPSAHMS ATALLQKAAQ MGATSSSSSF LRGLGLDVSS
401: SSPGASSSGQ QHQHQEAMRV SLPDASLQQW PPRLELEPAP MLSAGLGLGL PYDSTGAQVS LPELMMGQSS LFSGKPATLD FLGLGMSPSG ASAGRGLPAF
501: VQPIGGMAGT GAGAAETFGA GRGAQATPWE RNPSSSPIL
101: PEPSCVHHDP SRALGDLTGI KKHFCRKHGE KKWKCDKCSK KYAVQSDWKA HVKTCGSREY RCDCGTLFSR RDSFITHRAF CDALAEESAK ARAEAPSAED
201: GSSAAAVVPP PAPPPAPAPL RQQPPPPAPH HAEPRNETDT NATEAVQFAP PPPPPPPPPP PPPPQLQVPV LSQASVSAAA NVGASSSSSS VAGTSQSLLG
301: GMFAPSSMAS APQYADLGGR PERAHPAKPP PLCLATDASS SIFSAAPAVT AERQQFAPPP PSPSPSAHMS ATALLQKAAQ MGATSSSSSF LRGLGLDVSS
401: SSPGASSSGQ QHQHQEAMRV SLPDASLQQW PPRLELEPAP MLSAGLGLGL PYDSTGAQVS LPELMMGQSS LFSGKPATLD FLGLGMSPSG ASAGRGLPAF
501: VQPIGGMAGT GAGAAETFGA GRGAQATPWE RNPSSSPIL
001: MPVDLDNSST VSGDASVSST GNQNLTPKSV GKKKRNLPGM PDPDAEVIAL SPKTLMATNR FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSTKEVRKK
101: VYVCPVSGCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCE KCSKKYAVQS DWKAHSKICG TKEYKCDCGT LFSRRDSFIT HRAFCDALAE ESAKNHTQSK
201: KLYPETVTRK NPEIEQKSPA AVESSPSLPP SSPPSVAIAP APAISVETES VKIISSSVLP IQNSPESQEN NNHPEVIIEE ASRTIGFNVS SSDLSNDHSN
301: NNGGYAGLFV SSTASPSLYA SSTASPSLFA PSSSMEPISL CLSTNPSLFG PTIRDPPHFL TPLPPQPAMS ATALLQKAAQ MGSTGSGGSL LRGLGIVSTT
401: SSSMELSNHD ALSLAPGLGL GLPCSSGGSG SGLKELMMGN SSVFGPKQTT LDFLGLGRAV GNGGNTGGGL SALLTSIGGG GGIDLFGSGE FSGKDIGRSS
101: VYVCPVSGCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCE KCSKKYAVQS DWKAHSKICG TKEYKCDCGT LFSRRDSFIT HRAFCDALAE ESAKNHTQSK
201: KLYPETVTRK NPEIEQKSPA AVESSPSLPP SSPPSVAIAP APAISVETES VKIISSSVLP IQNSPESQEN NNHPEVIIEE ASRTIGFNVS SSDLSNDHSN
301: NNGGYAGLFV SSTASPSLYA SSTASPSLFA PSSSMEPISL CLSTNPSLFG PTIRDPPHFL TPLPPQPAMS ATALLQKAAQ MGSTGSGGSL LRGLGIVSTT
401: SSSMELSNHD ALSLAPGLGL GLPCSSGGSG SGLKELMMGN SSVFGPKQTT LDFLGLGRAV GNGGNTGGGL SALLTSIGGG GGIDLFGSGE FSGKDIGRSS
Arabidopsis Description
IDD1IDD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UMT2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.