Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24490 | Canola | nucleus | 81.64 | 84.83 |
| CDX77936 | Canola | nucleus | 81.42 | 84.4 |
| Bra036098.1-P | Field mustard | nucleus, plastid | 80.53 | 83.49 |
| AT5G66730.1 | Thale cress | nucleus | 75.0 | 67.8 |
| VIT_04s0023g01430.t01 | Wine grape | nucleus | 61.95 | 55.34 |
| KRH76829 | Soybean | nucleus | 62.17 | 54.35 |
| KRH08298 | Soybean | nucleus | 59.29 | 52.45 |
| KRH69942 | Soybean | nucleus | 59.96 | 51.62 |
| KRH69941 | Soybean | nucleus, plastid | 59.96 | 51.62 |
| PGSC0003DMT400033039 | Potato | nucleus, plastid | 56.86 | 48.95 |
| TraesCS4A01G041400.1 | Wheat | nucleus | 46.02 | 42.71 |
| AT4G02670.2 | Thale cress | nucleus, plastid | 38.05 | 42.57 |
| TraesCS4B01G262400.1 | Wheat | nucleus | 49.34 | 42.23 |
| GSMUA_Achr4P14030_001 | Banana | nucleus | 50.44 | 41.99 |
| TraesCS4D01G262500.1 | Wheat | nucleus | 48.67 | 41.83 |
| HORVU4Hr1G070950.8 | Barley | nucleus | 49.56 | 41.79 |
| EER95332 | Sorghum | nucleus | 48.23 | 41.52 |
| GSMUA_Achr3P29940_001 | Banana | nucleus | 53.32 | 41.48 |
| AT3G45260.1 | Thale cress | nucleus | 40.93 | 41.48 |
| AT1G55110.2 | Thale cress | nucleus | 40.93 | 40.66 |
| Zm00001d028139_P001 | Maize | nucleus | 48.23 | 40.45 |
| GSMUA_Achr4P07200_001 | Banana | nucleus | 48.01 | 40.19 |
| GSMUA_Achr7P25960_001 | Banana | nucleus | 51.99 | 39.7 |
| Os03t0197800-00 | Rice | nucleus | 48.45 | 39.67 |
| AT5G44160.1 | Thale cress | nucleus | 40.49 | 39.27 |
| AT1G03840.1 | Thale cress | nucleus | 42.7 | 38.14 |
| AT5G60470.2 | Thale cress | nucleus | 38.72 | 38.13 |
| Solyc02g062940.2.1 | Tomato | nucleus | 54.87 | 37.8 |
| AT5G03150.1 | Thale cress | nucleus | 41.15 | 36.98 |
| AT3G13810.2 | Thale cress | nucleus | 40.27 | 35.41 |
| AT2G02080.3 | Thale cress | nucleus, plastid | 39.6 | 34.69 |
| PGSC0003DMT400040064 | Potato | nucleus | 54.87 | 33.7 |
| AT1G14580.3 | Thale cress | nucleus | 35.84 | 33.68 |
| AT2G02070.2 | Thale cress | nucleus | 42.92 | 32.23 |
| AT1G25250.3 | Thale cress | nucleus | 25.66 | 30.13 |
| AT2G01940.3 | Thale cress | nucleus | 27.88 | 28.25 |
| AT1G68130.1 | Thale cress | nucleus | 25.22 | 27.21 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:824234 | ProteinID:AEE78699.1 | EMBL:AK226933 | ArrayExpress:AT3G50700 |
| EnsemblPlantsGene:AT3G50700 | RefSeq:AT3G50700 | TAIR:AT3G50700 | RefSeq:AT3G50700-TAIR-G | EnsemblPlants:AT3G50700.1 | TAIR:AT3G50700.1 |
| Unigene:At.50264 | Symbol:AtIDD2 | EMBL:BT014947 | EMBL:BT015836 | ProteinID:CAB62439.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0046872 | InterPro:IPR013087 | RefSeq:NP_190639.1 | PFAM:PF00096 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00028 | PFscan:PS50157 |
| PANTHER:PTHR10593 | PANTHER:PTHR10593:SF20 | UniProt:Q9SCQ6 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI00000A940B |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : | : |
Description
IDD2Protein indeterminate-domain 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCQ6]
Coordinates
chr3:+:18840411..18843053
Molecular Weight (calculated)
47945.8 Da
IEP (calculated)
9.954
GRAVY (calculated)
-0.463
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVDLDNSST VSGEASVSIS STGNQNPLPN STGKKKRNLP GMPDPESEVI ALSPKTLLAT NRFVCEICNK GFQRDQNLQL HRRGHNLPWK LRQKSNKEVK
101: KKVYVCPEVS CVHHDPSRAL GDLTGIKKHF CRKHGEKKWK CDKCSKKYAV QSDWKAHSKI CGTKEYKCDC GTLFSRRDSF ITHRAFCDAL AEENARSHHS
201: QSKKQNPEIL TRKNPVPNPV PAPVDTESAK IKSSSTLTIK QSESPKTPPE IVQEAPKPTS LNVVTSNGVF AGLFESSSAS PSIYTTSSSS KSLFASSSSI
301: EPISLGLSTS HGSSFLGSNR FHAQPAMSAT ALLQKAAQMG AASSGGSLLH GLGIVSSTST SIDAIVPHGL GLGLPCGGES SSGLKELMMG NSSVFGPKQT
401: TLDFLGLGRA VGNGNGPSNG LSTLVGGGTG IDMATTFGSG EFSGKDISRR KS
101: KKVYVCPEVS CVHHDPSRAL GDLTGIKKHF CRKHGEKKWK CDKCSKKYAV QSDWKAHSKI CGTKEYKCDC GTLFSRRDSF ITHRAFCDAL AEENARSHHS
201: QSKKQNPEIL TRKNPVPNPV PAPVDTESAK IKSSSTLTIK QSESPKTPPE IVQEAPKPTS LNVVTSNGVF AGLFESSSAS PSIYTTSSSS KSLFASSSSI
301: EPISLGLSTS HGSSFLGSNR FHAQPAMSAT ALLQKAAQMG AASSGGSLLH GLGIVSSTST SIDAIVPHGL GLGLPCGGES SSGLKELMMG NSSVFGPKQT
401: TLDFLGLGRA VGNGNGPSNG LSTLVGGGTG IDMATTFGSG EFSGKDISRR KS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.