Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04118 | Canola | nucleus | 22.02 | 89.92 |
| CDY09390 | Canola | nucleus | 21.6 | 88.24 |
| CDY53540 | Canola | nucleus | 27.78 | 69.59 |
| GSMUA_Achr10P... | Banana | nucleus | 67.49 | 68.48 |
| CDY04117 | Canola | nucleus | 28.6 | 64.95 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 47.94 | 64.01 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 60.7 | 60.33 |
| GSMUA_Achr5P11770_001 | Banana | nucleus, plastid | 49.38 | 60.3 |
| GSMUA_Achr9P23870_001 | Banana | nucleus | 51.03 | 57.14 |
| GSMUA_Achr4P11810_001 | Banana | mitochondrion, nucleus | 56.79 | 56.33 |
| GSMUA_Achr3P13990_001 | Banana | nucleus | 46.71 | 53.29 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 51.85 | 53.28 |
| KRG89168 | Soybean | nucleus, plastid | 37.24 | 52.01 |
| GSMUA_Achr1P02080_001 | Banana | nucleus | 58.44 | 51.92 |
| GSMUA_Achr3P25410_001 | Banana | nucleus | 34.36 | 51.23 |
| GSMUA_Achr2P08460_001 | Banana | nucleus | 32.72 | 50.48 |
| GSMUA_Achr7P14780_001 | Banana | nucleus | 37.04 | 50.42 |
| GSMUA_Achr1P17940_001 | Banana | nucleus | 48.35 | 50.32 |
| GSMUA_Achr2P16690_001 | Banana | nucleus | 37.86 | 50.0 |
| GSMUA_Achr7P13540_001 | Banana | nucleus | 36.01 | 47.95 |
| KRH34792 | Soybean | nucleus | 53.09 | 46.49 |
| GSMUA_Achr5P22140_001 | Banana | nucleus | 36.42 | 46.46 |
| KRG91985 | Soybean | nucleus | 53.5 | 46.43 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 54.12 | 45.98 |
| KRH49485 | Soybean | nucleus | 50.82 | 45.49 |
| GSMUA_Achr2P08910_001 | Banana | nucleus | 36.01 | 45.45 |
| GSMUA_Achr7P09150_001 | Banana | nucleus | 38.27 | 45.37 |
| GSMUA_Achr6P27030_001 | Banana | nucleus | 32.92 | 45.2 |
| GSMUA_Achr9P06650_001 | Banana | nucleus | 33.95 | 44.96 |
| KRG89167 | Soybean | nucleus, plastid | 50.62 | 44.81 |
| KRG90705 | Soybean | nucleus | 52.06 | 44.62 |
| GSMUA_Achr10P... | Banana | nucleus | 34.36 | 44.3 |
| KRH36039 | Soybean | nucleus | 51.85 | 44.13 |
| GSMUA_Achr10P... | Banana | nucleus | 40.33 | 43.65 |
| GSMUA_Achr11P... | Banana | nucleus | 47.53 | 43.34 |
| GSMUA_Achr11P... | Banana | nucleus | 45.47 | 43.25 |
| GSMUA_Achr4P05240_001 | Banana | nucleus | 44.44 | 43.2 |
| KRH49489 | Soybean | nucleus, plastid | 46.91 | 42.78 |
| GSMUA_Achr11P... | Banana | nucleus | 48.97 | 42.05 |
| CDY45271 | Canola | nucleus | 35.8 | 41.83 |
| VIT_01s0010g02090.t01 | Wine grape | extracellular, vacuole | 56.38 | 41.45 |
| GSMUA_Achr8P10040_001 | Banana | nucleus | 37.65 | 40.94 |
| GSMUA_Achr7P22720_001 | Banana | mitochondrion | 23.66 | 40.93 |
| CDY59418 | Canola | nucleus | 34.77 | 40.92 |
| CDY45270 | Canola | nucleus | 37.04 | 40.0 |
| Bra026204.1-P | Field mustard | nucleus, plastid | 36.83 | 39.78 |
| PGSC0003DMT400075837 | Potato | nucleus | 41.98 | 39.38 |
| CDY17440 | Canola | nucleus | 38.48 | 39.12 |
| GSMUA_Achr5P06450_001 | Banana | nucleus | 38.27 | 39.08 |
| Bra026819.1-P | Field mustard | nucleus | 37.24 | 38.76 |
| Solyc04g008500.2.1 | Tomato | nucleus | 41.15 | 38.68 |
| CDX81653 | Canola | nucleus | 37.04 | 38.54 |
| CDY17615 | Canola | nucleus | 41.77 | 38.52 |
| CDY03081 | Canola | nucleus | 41.36 | 38.36 |
| CDY15814 | Canola | nucleus | 37.04 | 38.05 |
| Bra026203.1-P | Field mustard | nucleus, plastid | 36.21 | 37.93 |
| Bra026616.1-P | Field mustard | nucleus | 39.71 | 37.77 |
| GSMUA_Achr11P... | Banana | nucleus | 32.1 | 37.68 |
| AT2G02080.3 | Thale cress | nucleus, plastid | 39.92 | 37.6 |
| Bra024833.1-P | Field mustard | plastid | 39.51 | 37.43 |
| CDY17614 | Canola | nucleus, plastid | 39.51 | 37.43 |
| AT1G14580.3 | Thale cress | nucleus | 36.83 | 37.21 |
| CDY03080 | Canola | nucleus, plastid | 39.3 | 37.02 |
| CDY09391 | Canola | nucleus | 43.0 | 36.86 |
| CDY15811 | Canola | nucleus | 43.0 | 36.8 |
| Bra024834.1-P | Field mustard | nucleus, plastid | 41.77 | 36.78 |
| Bra026617.1-P | Field mustard | nucleus | 43.0 | 35.42 |
| GSMUA_Achr4P14030_001 | Banana | nucleus | 39.51 | 35.36 |
| GSMUA_Achr7P24170_001 | Banana | nucleus | 36.01 | 34.86 |
| AT2G02070.2 | Thale cress | nucleus | 43.0 | 34.72 |
| Bra040974.1-P | Field mustard | nucleus, plastid | 41.56 | 34.53 |
| Bra023223.1-P | Field mustard | plastid | 33.95 | 34.38 |
| GSMUA_Achr4P07200_001 | Banana | nucleus | 37.86 | 34.07 |
| GSMUA_Achr3P29940_001 | Banana | nucleus | 39.92 | 33.39 |
| CDY12268 | Canola | nucleus | 30.04 | 32.74 |
| GSMUA_Achr7P25960_001 | Banana | nucleus | 39.09 | 32.09 |
| GSMUA_Achr7P18610_001 | Banana | nucleus | 24.49 | 31.48 |
| GSMUA_Achr6P02490_001 | Banana | nucleus | 23.66 | 31.08 |
| GSMUA_Achr10P... | Banana | nucleus | 24.49 | 31.07 |
| CDY68983 | Canola | nucleus | 24.9 | 30.95 |
| GSMUA_Achr5P23130_001 | Banana | nucleus | 23.87 | 30.53 |
| GSMUA_Achr2P21680_001 | Banana | nucleus, plastid | 22.02 | 27.94 |
| GSMUA_Achr10P... | Banana | nucleus | 22.63 | 27.57 |
| GSMUA_Achr3P20220_001 | Banana | nucleus | 23.66 | 27.12 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.89 | 21.26 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P07110_001 | EnsemblPlants:GSMUA_Achr1T07110_001 | EnsemblPlantsGene:GSMUA_Achr1G07110_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR013087 | InterPro:Znf_C2H2_jaz | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| PANTHER:PTHR10593 | PANTHER:PTHR10593:SF50 | PFAM:PF12171 | PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000296BA32 | UniProt:M0RXR9 | MapMan:15.5.15 | : |
Description
ZOS9-17 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G07110_001]
Coordinates
chr1:+:5628646..5631947
Molecular Weight (calculated)
52449.2 Da
IEP (calculated)
9.716
GRAVY (calculated)
-0.563
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAASSSTHF FGIREDGQHS HQQPQQPPQP PPPQELPATA SSANTPHSAA PPKKRRNLPG NPSKYLSLFS FTSFLCSLSL NLGLYMRSIM ITDPDAEVIA
101: LSPKTLMATN RFICEVCNKG FQREQNLQLH RRGHNLPWKL KQKNPNEVRR RVYLCPEPTC VHHDPSRALG DLTGIKKHFC RKHGEKKWKC DKCSKRYAVQ
201: SDWKAHSKIC GTREYRCDCG TLFSRRDSFI THRAFCDALA QESARLPGGI NTIGSHLYGG RGMNLGLPQL SSLQDQAQPS ADLLQLRGSS GTGHNAGGGT
301: EAMSLFAGDL MSNHTDTTMS SLYNPSVHAE SVVPQMSATA LLQKAAQMGA TSSGGSGSSM LRGLTASFSG GGGGEISRTG VGNENHFQDI MNSLANGNGG
401: VFGGFNQGLD GMGENKLHRN LSMGGFGGSD RLTRDFLGVG GMMRSMVGGI PQREQHHLGI DTTSSMDHSE MKSGSSTRSF GGGRLQ
101: LSPKTLMATN RFICEVCNKG FQREQNLQLH RRGHNLPWKL KQKNPNEVRR RVYLCPEPTC VHHDPSRALG DLTGIKKHFC RKHGEKKWKC DKCSKRYAVQ
201: SDWKAHSKIC GTREYRCDCG TLFSRRDSFI THRAFCDALA QESARLPGGI NTIGSHLYGG RGMNLGLPQL SSLQDQAQPS ADLLQLRGSS GTGHNAGGGT
301: EAMSLFAGDL MSNHTDTTMS SLYNPSVHAE SVVPQMSATA LLQKAAQMGA TSSGGSGSSM LRGLTASFSG GGGGEISRTG VGNENHFQDI MNSLANGNGG
401: VFGGFNQGLD GMGENKLHRN LSMGGFGGSD RLTRDFLGVG GMMRSMVGGI PQREQHHLGI DTTSSMDHSE MKSGSSTRSF GGGRLQ
001: MSSSYNTIAL SSTPTFLLSS AAAGPGPNNF NRQEAAMTMV QQQPTSSVAP PPKKRRNQPG NPNPDAEVIA LSPKTIMATN RFLCEVCNKG FQREQNLQLH
101: RRGHNLPWKL KQKSNKEVRR KVYLCPEPSC VHHDPARALG DLTGIKKHYY RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTKEYRCDCG TIFSRRDSYI
201: THRAFCDALI QESARNPTVS FTAMAAGGGG GARHGFYGGA SSALSHNHFG NNPNSGFTPL AAAGYNLNRS SSDKFEDFVP QATNPNPGPT NFLMQCSPNQ
301: GLLAQNNQSL MNHHGLISLG DNNNNNHNFF NLAYFQDTKN SDQTGVPSLF TNGADNNGPS ALLRGLTSSS SSSVVVNDFG DCDHGNLQGL MNSLAATTDQ
401: QGRSPSLFDL HFANNLSMGG SDRLTLDFLG VNGGIVSTVN GRGGRSGGPP LDAEMKFSHP NHPYGKA
101: RRGHNLPWKL KQKSNKEVRR KVYLCPEPSC VHHDPARALG DLTGIKKHYY RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTKEYRCDCG TIFSRRDSYI
201: THRAFCDALI QESARNPTVS FTAMAAGGGG GARHGFYGGA SSALSHNHFG NNPNSGFTPL AAAGYNLNRS SSDKFEDFVP QATNPNPGPT NFLMQCSPNQ
301: GLLAQNNQSL MNHHGLISLG DNNNNNHNFF NLAYFQDTKN SDQTGVPSLF TNGADNNGPS ALLRGLTSSS SSSVVVNDFG DCDHGNLQGL MNSLAATTDQ
401: QGRSPSLFDL HFANNLSMGG SDRLTLDFLG VNGGIVSTVN GRGGRSGGPP LDAEMKFSHP NHPYGKA
Arabidopsis Description
C2H2-like zinc finger protein [Source:TAIR;Acc:AT1G14580]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.