Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG96824 | Soybean | nucleus | 89.45 | 90.34 |
| KRG92880 | Soybean | nucleus | 73.83 | 71.46 |
| KRH33908 | Soybean | nucleus, plastid | 73.05 | 70.04 |
| KRH67268 | Soybean | nucleus | 29.49 | 57.85 |
| GSMUA_Achr8P10040_001 | Banana | nucleus | 38.48 | 44.07 |
| KRH15560 | Soybean | nucleus | 33.98 | 42.65 |
| KRG89168 | Soybean | nucleus, plastid | 28.71 | 42.24 |
| VIT_14s0060g02440.t01 | Wine grape | nucleus, plastid | 42.77 | 41.24 |
| KRH05443 | Soybean | nucleus | 34.18 | 39.77 |
| KRH61193 | Soybean | nucleus | 36.72 | 39.75 |
| KRH51873 | Soybean | nucleus | 36.33 | 39.66 |
| KRG95590 | Soybean | nucleus | 35.35 | 39.35 |
| KRG96409 | Soybean | nucleus | 40.43 | 38.69 |
| KRH32064 | Soybean | nucleus | 34.96 | 38.66 |
| KRH22332 | Soybean | nucleus | 35.74 | 38.61 |
| KRH23306 | Soybean | nucleus | 36.13 | 38.54 |
| KRH71370 | Soybean | nucleus | 34.38 | 38.43 |
| KRH68150 | Soybean | nucleus | 33.98 | 38.41 |
| KRH10015 | Soybean | nucleus | 35.35 | 38.11 |
| KRH47108 | Soybean | nucleus | 36.91 | 37.95 |
| KRH25657 | Soybean | nucleus | 34.57 | 37.58 |
| KRH49655 | Soybean | nucleus | 26.56 | 37.57 |
| KRH26995 | Soybean | nucleus | 34.96 | 37.29 |
| KRH71547 | Soybean | nucleus | 31.64 | 37.24 |
| GSMUA_Achr11P... | Banana | nucleus | 29.88 | 36.96 |
| KRH55868 | Soybean | nucleus | 34.18 | 36.92 |
| KRH69941 | Soybean | nucleus, plastid | 37.3 | 36.38 |
| KRH69942 | Soybean | nucleus | 37.3 | 36.38 |
| KRH76829 | Soybean | nucleus | 36.72 | 36.36 |
| KRH08298 | Soybean | nucleus | 36.13 | 36.2 |
| Os01t0935000-01 | Rice | nucleus | 33.59 | 36.13 |
| KRH44134 | Soybean | nucleus | 37.11 | 35.85 |
| EES04172 | Sorghum | nucleus | 34.96 | 34.42 |
| Zm00001d042202_P001 | Maize | nucleus | 34.96 | 34.1 |
| KRH22919 | Soybean | nucleus | 33.59 | 33.79 |
| KRG95964 | Soybean | nucleus | 33.59 | 33.73 |
| KRH19850 | Soybean | nucleus | 34.57 | 33.71 |
| KRH32442 | Soybean | nucleus | 34.77 | 33.46 |
| KRH26399 | Soybean | nucleus | 32.62 | 33.4 |
| TraesCS3B01G497200.1 | Wheat | nucleus | 33.2 | 33.27 |
| KRH49489 | Soybean | nucleus, plastid | 34.57 | 33.21 |
| TraesCS3D01G449900.1 | Wheat | nucleus | 33.01 | 33.2 |
| KRH49485 | Soybean | nucleus | 35.16 | 33.15 |
| KRG90705 | Soybean | nucleus | 36.52 | 32.98 |
| KRH67672 | Soybean | nucleus | 33.01 | 32.88 |
| KRH36039 | Soybean | nucleus | 36.52 | 32.75 |
| KRH24905 | Soybean | nucleus | 34.57 | 32.72 |
| KRG89167 | Soybean | nucleus, plastid | 34.77 | 32.42 |
| KRG89014 | Soybean | nucleus | 35.55 | 31.71 |
| KRH34792 | Soybean | nucleus | 33.98 | 31.35 |
| KRG91985 | Soybean | nucleus | 33.79 | 30.89 |
| KRH41885 | Soybean | nucleus | 22.66 | 30.53 |
| KRH60588 | Soybean | nucleus | 23.05 | 29.5 |
| KRH58582 | Soybean | nucleus | 22.85 | 26.59 |
| KRH38986 | Soybean | nucleus | 24.02 | 25.95 |
| KRH42485 | Soybean | nucleus | 22.27 | 25.22 |
| KRH48724 | Soybean | nucleus | 23.63 | 25.05 |
Protein Annotations
| EntrezGene:100776872 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02002119 | EnsemblPlantsGene:GLYMA_03G236600 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | UniProt:I1JRB5 | InterPro:IPR013087 | EnsemblPlants:KRH68532 | ProteinID:KRH68532 |
| ProteinID:KRH68532.1 | PFAM:PF00096 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF59 |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI00023376AA | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:-:43649486..43653784
Molecular Weight (calculated)
55379.1 Da
IEP (calculated)
8.486
GRAVY (calculated)
-0.611
Length
512 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNSNITSCD SWRFSTENNI NSGEDAAVAV KQQLEMLGQL HSPNSNTSTT TNNSNGSASN TDSQPPAKKK RNLPGNPDPS AEVIALSPNT LVATNRFVCE
101: ICNKGFQRDQ NLQLHRRGHN LPWKLKLRTT TDVRKRVYVC PEPSCVHHNP ARALGDLTGI KKHFSRKHGE KKWKCEKCSK KYAVQSDWKA HSKICGTKEY
201: KCDCGTIFSR RDSFITHRAF CDALSEENNK FNEGQLPKMH GSNLQPPTII PNLVASLPIN GANNHKHPLS LPHDLMTTIP AKPFNNNMAA AFTRSLSSTS
301: QLSSKSPNIN MFEENGLLSP HMSATALLQK AAEMGATVNS NSNNNSMMMS GEKSFINVTS MAPPSYGIMN PNMHNGQQDL SQYNFIANGV VDGGSNGMGM
401: SGLDMFNAIL DQSKALSKII EQNNRSSTYN GVLHAMNNGR SSGSIEVGGT KESEDVMTLD LLGIGGGGGG GGDGNFYGGD QQLEMVGGDG IWGNWSNKNA
501: GLESFSATNS TI
101: ICNKGFQRDQ NLQLHRRGHN LPWKLKLRTT TDVRKRVYVC PEPSCVHHNP ARALGDLTGI KKHFSRKHGE KKWKCEKCSK KYAVQSDWKA HSKICGTKEY
201: KCDCGTIFSR RDSFITHRAF CDALSEENNK FNEGQLPKMH GSNLQPPTII PNLVASLPIN GANNHKHPLS LPHDLMTTIP AKPFNNNMAA AFTRSLSSTS
301: QLSSKSPNIN MFEENGLLSP HMSATALLQK AAEMGATVNS NSNNNSMMMS GEKSFINVTS MAPPSYGIMN PNMHNGQQDL SQYNFIANGV VDGGSNGMGM
401: SGLDMFNAIL DQSKALSKII EQNNRSSTYN GVLHAMNNGR SSGSIEVGGT KESEDVMTLD LLGIGGGGGG GGDGNFYGGD QQLEMVGGDG IWGNWSNKNA
501: GLESFSATNS TI
001: MTTEDQTISS SGGYVQSSST TDHVDHHHHD QHESLNPPLV KKKRNLPGNP DPEAEVIALS PKTLMATNRF LCEICGKGFQ RDQNLQLHRR GHNLPWKLKQ
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI
Arabidopsis Description
MGPUncharacterized protein At1g03840 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUS5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.