CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24905	Soybean	nucleus	84.84	90.02
KRH67268	Soybean	nucleus	26.48	58.24
KRH22919	Soybean	nucleus	50.35	56.78
KRH26399	Soybean	nucleus	48.78	56.0
KRG89168	Soybean	nucleus, plastid	27.87	45.98
Solyc11g069240.1.1	Tomato	nucleus	33.62	42.98
VIT_06s0004g03070.t01	Wine grape	nucleus	36.59	42.08
KRH10015	Soybean	nucleus	34.67	41.89
PGSC0003DMT400020945	Potato	nucleus	36.41	41.72
KRH47108	Soybean	nucleus	36.06	41.57
KRH15560	Soybean	nucleus	29.27	41.18
KRH23306	Soybean	nucleus	34.32	41.04
KRH49655	Soybean	nucleus	25.44	40.33
KRH55868	Soybean	nucleus	33.1	40.08
KRH25657	Soybean	nucleus	32.75	39.92
KRH22332	Soybean	nucleus	32.75	39.66
KRG95590	Soybean	nucleus	31.71	39.57
KRH05443	Soybean	nucleus	30.31	39.55
KRH51873	Soybean	nucleus	32.23	39.45
KRH61193	Soybean	nucleus	32.23	39.11
KRH44134	Soybean	nucleus	36.06	39.06
KRH32064	Soybean	nucleus	31.36	38.88
KRG95964	Soybean	nucleus	34.32	38.63
KRH71370	Soybean	nucleus	30.66	38.43
KRH26995	Soybean	nucleus	32.06	38.33
KRH76829	Soybean	nucleus	34.49	38.3
KRH67672	Soybean	nucleus	34.15	38.13
KRH19850	Soybean	nucleus	34.49	37.71
KRH32442	Soybean	nucleus	34.84	37.59
KRH08298	Soybean	nucleus	33.45	37.57
KRH69942	Soybean	nucleus	34.15	37.33
KRH69941	Soybean	nucleus, plastid	34.15	37.33
KRH71547	Soybean	nucleus	27.7	36.55
KRH49485	Soybean	nucleus	34.32	36.28
KRH68150	Soybean	nucleus	28.57	36.2
KRG96824	Soybean	nucleus	31.71	35.9
KRH49489	Soybean	nucleus, plastid	33.1	35.65
KRH68532	Soybean	nucleus	31.71	35.55
KRG92880	Soybean	nucleus	32.4	35.16
KRG89167	Soybean	nucleus, plastid	33.62	35.15
KRG96409	Soybean	nucleus	32.75	35.14
KRH33908	Soybean	nucleus, plastid	32.58	35.02
KRG91985	Soybean	nucleus	33.8	34.64
KRH34792	Soybean	nucleus	33.45	34.59
KRG90705	Soybean	nucleus	33.8	34.22
KRH36039	Soybean	nucleus	33.62	33.8
KRH41885	Soybean	nucleus	19.69	29.74
KRH60588	Soybean	nucleus	20.21	29.0
KRH58582	Soybean	nucleus	21.25	27.73
KRH42485	Soybean	nucleus	20.91	26.55
KRH38986	Soybean	nucleus	21.43	25.95
KRH48724	Soybean	nucleus	21.25	25.26

Protein Annotations

EntrezGene:100817691	MapMan:15.5.15	Gene3D:3.30.160.60	EnsemblPlantsGene:GLYMA_U019400	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:JKD-like	UniProt:K7LPW5	EnsemblPlants:KRG89014	ProteinID:KRG89014
ProteinID:KRG89014.1	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF42	SMART:SM00355
SUPFAM:SSF57667	UniParc:UPI0002969266	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:

Description

hypothetical protein

Coordinates

chrscaffold_21:-:3222604..3225618

Molecular Weight (calculated)

63585.3 Da

IEP (calculated)

8.552

GRAVY (calculated)

-0.733

Length

574 amino acids

Sequence
(BLAST)

001: MMSEETFSVP PPNSTIRATS LVHHHAHVQP PSPSPNPNPN PNSNPAKRRR SLPGTPDPDA EVVALSPKSL MATNRFLCEI CNKGFQRDQN LQLHRRGHNL
101: PWKLKQRANK DQVRKKVYVC PEKSCVHHDP SRALGDLTGI KKHYSRKHGE KKWKCDKCSK KYAVQSDWKA HSKICGTREY KCDCGTLFSR KDSFITHRAF
201: CDALAEESAR VTTVPAALSN LRNDHHHHLT NAQASRIPQI NFSGFHSSDQ LFGGGSSEAL LANHHHHQQQ KLRLPLWLDH HQVNNNPQVL HHHTLNNFST
301: KPNGFTTNSG SGPNSVTDLV QTMDMFGSQT EFVNYRYPEA SFGGGNANVS VLPPHELKQE QEENKEHLSH SGASYNNLYL SSSDIQNPPP HHHHYMSATT
401: LLHKAVQMGS SRLMNDNVFG SILGTTTTNS NNNNVVVEVQ KLNELVSVEA AGCTNNNLGG GYLLNDSNNS NSFVVVNGTN KGGGLEHMVM PVDEETQQAS
501: IMGKQLHSSL SSNNKNQQLG LTRDFLGVGD HNNSIDSIRR PFLQQDLVEF NAMGSASASA SVMNLQSQYG GHYC

Best Arabidopsis Sequence Match ( AT3G45260.2 )
(BLAST)

001: MMMPDDHHPL SFPSYVLHQE HIAPNPNPNP NPTSSNSAKR KRNLPGNPDP DAEVIALSPN SLMTTNRFIC EVCNKGFKRD QNLQLHRRGH NLPWKLKQRT
101: NKEQVKKKVY ICPEKTCVHH DPARALGDLT GIKKHFSRKH GEKKWKCDKC SKKYAVMSDW KAHSKICGTK EYRCDCGTLF SRKDSFITHR AFCDALAEES
201: ARFVSVPPAP AYLNNALDVE VNHGNINQNH QQRQLNTTSS QLDQPGFNTN RNNIAFLGQT LPTNVFASSS SPSPRSASDS LQNLWHLQGQ SSHQWLLNEN
301: NNNNNNILQR GISKNQEEHE MKNVISNGSL FSSEARNNTN NYNQNGGQIA SMSATALLQK AAQMGSKRSS SSSSNSKTFG LMTSIFNNKQ AENIKTKEVD
401: ERGFTRDFLG VGSQHRSWPL LMVNHNLPDS SPPASTDGTP TADMNQ

Arabidopsis Description

IDD9Protein indeterminate-domain 9 [Source:UniProtKB/Swiss-Prot;Acc:Q944L3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.