Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 4
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g084180.1.1 | Tomato | nucleus | 95.94 | 95.74 |
| PGSC0003DMT400020945 | Potato | nucleus | 48.98 | 48.1 |
| PGSC0003DMT400008694 | Potato | nucleus, plastid | 51.22 | 47.73 |
| PGSC0003DMT400004390 | Potato | nucleus | 41.06 | 44.3 |
| VIT_08s0040g02100.t01 | Wine grape | nucleus | 42.68 | 42.68 |
| PGSC0003DMT400063501 | Potato | nucleus | 30.89 | 42.22 |
| KRH67672 | Soybean | nucleus | 43.9 | 42.02 |
| GSMUA_Achr7P22720_001 | Banana | mitochondrion | 23.98 | 41.99 |
| KRG95964 | Soybean | nucleus | 43.5 | 41.96 |
| KRH19850 | Soybean | nucleus | 42.48 | 39.81 |
| KRH32442 | Soybean | nucleus | 42.48 | 39.29 |
| PGSC0003DMT400021189 | Potato | nucleus | 37.2 | 39.1 |
| AT5G03150.1 | Thale cress | nucleus | 39.43 | 38.57 |
| CDY44344 | Canola | nucleus | 39.02 | 38.4 |
| CDY10404 | Canola | nucleus | 39.43 | 38.26 |
| CDY11241 | Canola | nucleus | 38.82 | 37.97 |
| Bra005741.1-P | Field mustard | nucleus | 38.62 | 37.7 |
| CDX80854 | Canola | nucleus | 38.62 | 37.62 |
| Bra009549.1-P | Field mustard | nucleus | 39.02 | 37.21 |
| CDX70328 | Canola | nucleus | 38.82 | 37.16 |
| PGSC0003DMT400075837 | Potato | nucleus | 38.62 | 36.68 |
| PGSC0003DMT400049788 | Potato | nucleus | 35.37 | 36.48 |
| PGSC0003DMT400012504 | Potato | nucleus | 36.79 | 36.06 |
| PGSC0003DMT400024272 | Potato | nucleus | 35.77 | 35.56 |
| PGSC0003DMT400013174 | Potato | nucleus | 36.18 | 35.18 |
| PGSC0003DMT400029550 | Potato | nucleus | 32.32 | 35.1 |
| PGSC0003DMT400033039 | Potato | nucleus, plastid | 37.2 | 34.86 |
| PGSC0003DMT400006385 | Potato | nucleus | 38.21 | 34.75 |
| PGSC0003DMT400069306 | Potato | nucleus | 25.61 | 30.66 |
| PGSC0003DMT400079735 | Potato | nucleus, plastid | 26.02 | 29.29 |
| PGSC0003DMT400040064 | Potato | nucleus | 35.16 | 23.51 |
Protein Annotations
| EntrezGene:102580793 | MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0046872 | InterPro:IPR013087 | UniProt:M1APA7 | PFAM:PF12171 | EnsemblPlantsGene:PGSC0003DMG400010478 | PGSC:PGSC0003DMG400010478 |
| EnsemblPlants:PGSC0003DMT400027159 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF99 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0002963F08 | RefSeq:XP_006339068.1 | InterPro:Znf_C2H2_jaz | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| SEG:seg | : | : | : | : | : |
Description
Zinc finger protein JACKDAW [Source:PGSC_GENE;Acc:PGSC0003DMG400010478]
Coordinates
chr10:+:54910606..54913217
Molecular Weight (calculated)
54659.1 Da
IEP (calculated)
9.419
GRAVY (calculated)
-0.702
Length
492 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSGDVFSFP SSVKAVLPHH HQELQTTNPN PKPNTSSKKR RNLPGTPDPD AEVIALSPKS LMATNRFICE ICNKGFQRDQ NLQLHRRGHN LPWKLKQRNK
101: LEQVKKKVYI CPEKTCIHHD PSRALGDLTG IKKHFSRKHG EKKWKCEKCS KKYAVQSDWK AHSKTCGTRE YKCDCGTLFS RKDSFITHRA FCDALAEESS
201: RITSVGATNL INFPNNVTLL NQQQSNLHGG FAGFRSDFGS YTTGNNNNSL HQHQHQQQQQ KPRLSLWLDQ QAAQISSSSN LFDNSSTGGF QEMIQMQSQN
301: VFGSSNSTSA NFSMAEAYNS LYSDSQNSQL TKQNSTTPMS ATALLQKAAQ MGSTKSNQST FFSNNFSKLN SSSSSSPNTP TFTSLQSCET TDQIFAKKSE
401: DYTTSLLHSN NGLIGCPNFT SSGINKAINL DEAIMQTVGM HSTQAVSMNG MDNCLTRDFL GIKHEGNCQF LPQEIIKFAS MNSSAMGLSH LQ
101: LEQVKKKVYI CPEKTCIHHD PSRALGDLTG IKKHFSRKHG EKKWKCEKCS KKYAVQSDWK AHSKTCGTRE YKCDCGTLFS RKDSFITHRA FCDALAEESS
201: RITSVGATNL INFPNNVTLL NQQQSNLHGG FAGFRSDFGS YTTGNNNNSL HQHQHQQQQQ KPRLSLWLDQ QAAQISSSSN LFDNSSTGGF QEMIQMQSQN
301: VFGSSNSTSA NFSMAEAYNS LYSDSQNSQL TKQNSTTPMS ATALLQKAAQ MGSTKSNQST FFSNNFSKLN SSSSSSPNTP TFTSLQSCET TDQIFAKKSE
401: DYTTSLLHSN NGLIGCPNFT SSGINKAINL DEAIMQTVGM HSTQAVSMNG MDNCLTRDFL GIKHEGNCQF LPQEIIKFAS MNSSAMGLSH LQ
001: MQMIPGDPFS ISSSMGGFVH QETHLHHLQQ QIPDLNPNSN PNPNAKPNSS SAKKKRNQPG TPDPDADVIA LSPTTLMATN RFVCEICNKG FQRDQNLQLH
101: RRGHNLPWKL KQRSKQEVIK KKVYICPIKT CVHHDASRAL GDLTGIKKHY SRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTREYKCDC GTLFSRKDSF
201: ITHRAFCDAL TEEGARMSSL SNNNPVISTT NLNFGNESNV MNNPNLPHGF VHRGVHHPDI NAAISQFGLG FGHDLSAMHA QGLSEMVQMA STGNHHLFPS
301: SSSSLPDFSG HHQFQIPMTS TNPSLTLSSS STSQQTSASL QHQTLKDSSF SPLFSSSSEN KQNKPLSPMS ATALLQKAAQ MGSTRSNSST APSFFAGPTM
401: TSSSATASPP PRSSSPMMIQ QQLNNFNTNV LRENHNRAPP PLSGVSTSSV DNNPFQSNRS GLNPAQQMGL TRDFLGVSNE HHPHQTGRRP FLPQELARFA
501: PLG
101: RRGHNLPWKL KQRSKQEVIK KKVYICPIKT CVHHDASRAL GDLTGIKKHY SRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTREYKCDC GTLFSRKDSF
201: ITHRAFCDAL TEEGARMSSL SNNNPVISTT NLNFGNESNV MNNPNLPHGF VHRGVHHPDI NAAISQFGLG FGHDLSAMHA QGLSEMVQMA STGNHHLFPS
301: SSSSLPDFSG HHQFQIPMTS TNPSLTLSSS STSQQTSASL QHQTLKDSSF SPLFSSSSEN KQNKPLSPMS ATALLQKAAQ MGSTRSNSST APSFFAGPTM
401: TSSSATASPP PRSSSPMMIQ QQLNNFNTNV LRENHNRAPP PLSGVSTSSV DNNPFQSNRS GLNPAQQMGL TRDFLGVSNE HHPHQTGRRP FLPQELARFA
501: PLG
Arabidopsis Description
JKDZinc finger protein JACKDAW [Source:UniProtKB/Swiss-Prot;Acc:Q700D2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.