Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400008694 | Potato | nucleus, plastid | 95.64 | 95.64 |
Solyc11g069240.1.1 | Tomato | nucleus | 56.82 | 66.82 |
Solyc10g084180.1.1 | Tomato | nucleus | 48.48 | 51.93 |
Solyc09g007550.2.1 | Tomato | nucleus, plastid | 38.45 | 44.23 |
VIT_08s0040g02100.t01 | Wine grape | nucleus | 39.77 | 42.68 |
Solyc01g099340.2.1 | Tomato | nucleus | 34.09 | 42.45 |
GSMUA_Achr7P22720_001 | Banana | mitochondrion | 22.35 | 41.99 |
KRH19850 | Soybean | nucleus | 40.15 | 40.38 |
KRH32442 | Soybean | nucleus | 40.15 | 39.85 |
Solyc08g063040.2.1 | Tomato | nucleus | 35.04 | 39.61 |
KRG95964 | Soybean | nucleus | 38.26 | 39.61 |
CDY44344 | Canola | nucleus | 37.31 | 39.4 |
AT5G03150.1 | Thale cress | nucleus | 37.5 | 39.36 |
KRH67672 | Soybean | nucleus | 38.26 | 39.3 |
CDY11241 | Canola | nucleus | 37.12 | 38.97 |
CDY10404 | Canola | nucleus | 37.31 | 38.86 |
Bra005741.1-P | Field mustard | nucleus | 36.93 | 38.69 |
CDX80854 | Canola | nucleus | 36.93 | 38.61 |
Bra009549.1-P | Field mustard | nucleus | 37.31 | 38.18 |
CDX70328 | Canola | nucleus | 37.12 | 38.13 |
Solyc04g080130.2.1 | Tomato | nucleus | 35.42 | 37.33 |
Solyc09g065670.2.1 | Tomato | nucleus | 33.14 | 37.23 |
Solyc06g062670.2.1 | Tomato | nucleus | 35.23 | 36.98 |
Solyc07g053570.2.1 | Tomato | nucleus | 34.85 | 36.65 |
Solyc04g008500.2.1 | Tomato | nucleus | 35.61 | 36.36 |
Solyc09g074780.2.1 | Tomato | nucleus, plastid | 35.04 | 35.58 |
Solyc03g121660.2.1 | Tomato | nucleus | 36.17 | 35.24 |
Solyc01g005060.2.1 | Tomato | nucleus | 21.4 | 33.33 |
Solyc06g072360.2.1 | Tomato | nucleus | 23.48 | 31.63 |
Solyc05g054030.2.1 | Tomato | nucleus | 20.64 | 28.61 |
Solyc02g062940.2.1 | Tomato | nucleus | 33.71 | 27.13 |
Solyc03g098070.2.1 | Tomato | nucleus | 17.42 | 25.27 |
Protein Annotations
EnsemblPlants:Solyc06g075250.2.1 | EnsemblPlantsGene:Solyc06g075250.2 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
GO:GO:0046872 | InterPro:IPR013087 | InterPro:JKD-like | InterPro:Znf_C2H2_jaz | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
PANTHER:PTHR10593 | PANTHER:PTHR10593:SF42 | PFAM:PF12171 | PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg |
SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0002766993 | UniProt:K4C9P0 | MapMan:15.5.15 | : |
Description
No Description!
Coordinates
chr6:-:46691975..46694476
Molecular Weight (calculated)
58188.1 Da
IEP (calculated)
9.252
GRAVY (calculated)
-0.793
Length
528 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSDDGLSSL AFIQDPNSNP TNNNPNPNSN PSAKRKRNLP GKPDPDAEVI ALSPKSLMAT NRFICEICNK GFQRDQNLQL HRRGHNLPWK LKQRNKNEVI
101: KKKVYICPEK TCIHHDPSRA LGDLTGIKKH FSRKHGEKKW KCEKCSKKYA VQSDWKAHTK ICGTREYKCD CGTLFSRKDS FITHRAFCDA LAEESARFTS
201: VPSTANLNFR NEILLNGGFG NTNLQQSTGN PQFGSNLFRP EFMGLGLDPA ISHHHQPQLN NVDGQKPRIP LWLDNNMNPN PGNDFLVASS SSTTSNLPHH
301: ELVQIAAHNN TQQWFINGTG VGDDSGIGSS SSQLPSRVLL KEEEENKRNM SETISSMYYN NHHNETTAPA THMSATALLQ KAAQMGSTRS NSALFGTGFG
401: LMGSSFSKSN GQGQFATHDQ NFNGLMMHSP NNNNSNQGNR LLFGDMNSTS LEGNASGKNS DPFNLMPRNN KGKQVNLSGN EAMEGGLTRD FLGVGGNESR
501: PFLSKNELAK FGNISASAMG LSDYSETH
101: KKKVYICPEK TCIHHDPSRA LGDLTGIKKH FSRKHGEKKW KCEKCSKKYA VQSDWKAHTK ICGTREYKCD CGTLFSRKDS FITHRAFCDA LAEESARFTS
201: VPSTANLNFR NEILLNGGFG NTNLQQSTGN PQFGSNLFRP EFMGLGLDPA ISHHHQPQLN NVDGQKPRIP LWLDNNMNPN PGNDFLVASS SSTTSNLPHH
301: ELVQIAAHNN TQQWFINGTG VGDDSGIGSS SSQLPSRVLL KEEEENKRNM SETISSMYYN NHHNETTAPA THMSATALLQ KAAQMGSTRS NSALFGTGFG
401: LMGSSFSKSN GQGQFATHDQ NFNGLMMHSP NNNNSNQGNR LLFGDMNSTS LEGNASGKNS DPFNLMPRNN KGKQVNLSGN EAMEGGLTRD FLGVGGNESR
501: PFLSKNELAK FGNISASAMG LSDYSETH
001: MMMPDDHHPL SFPSYVLHQE HIAPNPNPNP NPTSSNSAKR KRNLPGNPDP DAEVIALSPN SLMTTNRFIC EVCNKGFKRD QNLQLHRRGH NLPWKLKQRT
101: NKEQVKKKVY ICPEKTCVHH DPARALGDLT GIKKHFSRKH GEKKWKCDKC SKKYAVMSDW KAHSKICGTK EYRCDCGTLF SRKDSFITHR AFCDALAEES
201: ARFVSVPPAP AYLNNALDVE VNHGNINQNH QQRQLNTTSS QLDQPGFNTN RNNIAFLGQT LPTNVFASSS SPSPRSASDS LQNLWHLQGQ SSHQWLLNEN
301: NNNNNNILQR GISKNQEEHE MKNVISNGSL FSSEARNNTN NYNQNGGQIA SMSATALLQK AAQMGSKRSS SSSSNSKTFG LMTSIFNNKQ AENIKTKEVD
401: ERGFTRDFLG VGSQHRSWPL LMVNHNLPDS SPPASTDGTP TADMNQ
101: NKEQVKKKVY ICPEKTCVHH DPARALGDLT GIKKHFSRKH GEKKWKCDKC SKKYAVMSDW KAHSKICGTK EYRCDCGTLF SRKDSFITHR AFCDALAEES
201: ARFVSVPPAP AYLNNALDVE VNHGNINQNH QQRQLNTTSS QLDQPGFNTN RNNIAFLGQT LPTNVFASSS SPSPRSASDS LQNLWHLQGQ SSHQWLLNEN
301: NNNNNNILQR GISKNQEEHE MKNVISNGSL FSSEARNNTN NYNQNGGQIA SMSATALLQK AAQMGSKRSS SSSSNSKTFG LMTSIFNNKQ AENIKTKEVD
401: ERGFTRDFLG VGSQHRSWPL LMVNHNLPDS SPPASTDGTP TADMNQ
Arabidopsis Description
IDD9Protein indeterminate-domain 9 [Source:UniProtKB/Swiss-Prot;Acc:Q944L3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.