Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007281.1-P | Field mustard | cytosol | 88.14 | 89.14 |
| CDY27182 | Canola | cytosol | 87.92 | 88.91 |
| CDX72100 | Canola | cytosol | 88.59 | 88.39 |
| VIT_08s0040g00290.t01 | Wine grape | extracellular | 40.72 | 79.48 |
| KRG95023 | Soybean | cytosol, nucleus | 69.57 | 69.42 |
| KRH66657 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 68.01 | 67.86 |
| GSMUA_Achr8P26090_001 | Banana | cytosol | 59.96 | 60.63 |
| TraesCS5D01G152200.1 | Wheat | cytosol | 56.82 | 57.47 |
| TraesCS5B01G138600.2 | Wheat | cytosol | 56.6 | 57.24 |
| TraesCS5A01G138500.1 | Wheat | cytosol | 55.93 | 57.08 |
| Os12t0129400-01 | Rice | cytosol | 55.26 | 55.76 |
| KXG22856 | Sorghum | cytosol | 55.26 | 55.63 |
| Zm00001d023264_P004 | Maize | cytosol | 54.81 | 55.06 |
| Os11t0132700-01 | Rice | cytosol, nucleus | 54.36 | 54.85 |
| PGSC0003DMT400046078 | Potato | extracellular, plasma membrane | 59.28 | 54.41 |
| Solyc08g036600.1.1 | Tomato | nucleus | 24.16 | 53.2 |
| KRH37825 | Soybean | cytosol, endoplasmic reticulum, plastid, vacuole | 19.46 | 50.0 |
| HORVU5Hr1G045070.3 | Barley | plastid | 54.14 | 48.3 |
| Zm00001d023266_P001 | Maize | cytosol, golgi, plastid | 14.99 | 46.53 |
| Os12t0131300-01 | Rice | cytosol | 8.72 | 39.39 |
| Os12t0129650-01 | Rice | cytosol | 3.58 | 21.05 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:23.5.1.1.1.8 | EntrezGene:824857 | ProteinID:AEE79584.1 | EMBL:AK118686 | ArrayExpress:AT3G56900 |
| EnsemblPlantsGene:AT3G56900 | RefSeq:AT3G56900 | TAIR:AT3G56900 | RefSeq:AT3G56900-TAIR-G | EnsemblPlants:AT3G56900.1 | TAIR:AT3G56900.1 |
| Unigene:At.71107 | EMBL:BT005366 | ProteinID:CAC00753.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005643 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006810 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0015031 |
| GO:GO:0051028 | InterPro:IPR001680 | InterPro:IPR015943 | RefSeq:NP_191249.2 | PFAM:PF00400 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR14494 | UniProt:Q8GWR1 | SMART:SM00320 | SUPFAM:SSF50960 | UniParc:UPI000000C616 | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | SEG:seg | : | : | : | : |
Description
AAASAladin [Source:UniProtKB/Swiss-Prot;Acc:Q8GWR1]
Coordinates
chr3:+:21066122..21069483
Molecular Weight (calculated)
48488.2 Da
IEP (calculated)
5.939
GRAVY (calculated)
-0.172
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MASFPHPGSV TVCEINRDLI TAQNLSDERA QETYGKVLGM VFSPVSFDST PSSLQENEGQ ENGDKASGES KGLVATLQMK VADSLKQILQ PTDVTLLSEI
101: DLQGVSWHQG KHIIAFISGA NQVTIRDYED KDEKEPCILT SDSQRNVKAL EWRPNGGKSL SIACRGGICI WAASYPGNMA LVRSGGSALR GSLSRGSGTR
201: WILVDFLRCQ NDEQISALSW SPCGRYLASA SYDSSSFTIW DVSQGAGTPI RRGLGGISML KWSPTGDYFF AARFDGTFCL WETNTWTSEP WSLSSGSGSV
301: TGAIWDPEGR FILISFSKSS TLGSVHFSSK PPSLDAHLLP VELPEIASLT GCEGIEKIAW DASGERLAVS YKGGDENYKG LIAIYDTRRT PIVSASLVGF
401: IRGPGENPKA LSFSFHDKFK QGPLLSVCWS TGFCCTYPLI FRSHVLP
101: DLQGVSWHQG KHIIAFISGA NQVTIRDYED KDEKEPCILT SDSQRNVKAL EWRPNGGKSL SIACRGGICI WAASYPGNMA LVRSGGSALR GSLSRGSGTR
201: WILVDFLRCQ NDEQISALSW SPCGRYLASA SYDSSSFTIW DVSQGAGTPI RRGLGGISML KWSPTGDYFF AARFDGTFCL WETNTWTSEP WSLSSGSGSV
301: TGAIWDPEGR FILISFSKSS TLGSVHFSSK PPSLDAHLLP VELPEIASLT GCEGIEKIAW DASGERLAVS YKGGDENYKG LIAIYDTRRT PIVSASLVGF
401: IRGPGENPKA LSFSFHDKFK QGPLLSVCWS TGFCCTYPLI FRSHVLP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.