Factsheet for Zm00001d023264_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22856	Sorghum	cytosol	95.06	95.27
Os11t0132700-01	Rice	cytosol, nucleus	84.94	85.33
Os12t0129400-01	Rice	cytosol	84.72	85.1
TraesCS5B01G138600.2	Wheat	cytosol	82.7	83.26
TraesCS5D01G152200.1	Wheat	cytosol	82.25	82.81
TraesCS5A01G138500.1	Wheat	cytosol	81.35	82.65
Zm00001d023266_P001	Maize	cytosol, golgi, plastid	24.72	76.39
HORVU5Hr1G045070.3	Barley	plastid	79.55	70.66
GSMUA_Achr8P26090_001	Banana	cytosol	65.39	65.84
Os12t0131300-01	Rice	cytosol	13.71	61.62
VIT_08s0040g00290.t01	Wine grape	extracellular	30.34	58.95
PGSC0003DMT400046078	Potato	extracellular, plasma membrane	62.02	56.67
AT3G56900.1	Thale cress	cytosol	55.06	54.81
Bra007281.1-P	Field mustard	cytosol	53.26	53.62
CDX72100	Canola	cytosol	53.93	53.57
CDY27182	Canola	cytosol	53.03	53.39
KRG95023	Soybean	cytosol, nucleus	53.26	52.9
KRH66657	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	52.58	52.23
Solyc08g036600.1.1	Tomato	nucleus	22.02	48.28
Os12t0129650-01	Rice	cytosol	6.97	40.79
KRH37825	Soybean	cytosol, endoplasmic reticulum, plastid, vacuole	12.36	31.61

Protein Annotations

EMBL:BT067274	EnsemblPlants:Zm00001d023264_P004	EnsemblPlants:Zm00001d023264_T004	EnsemblPlantsGene:Zm00001d023264	EntrezGene:100383460	Gene3D:2.130.10.10
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_dom_sf	PANTHER:PTHR14494	ProteinID:AQK38780.1	ProteinID:AQK38782.1	SMART:SM00320
SUPFAM:SSF50978	UniParc:UPI000195CC73	UniProt:C0PG55	MapMan:23.5.1.1.1.8	:	:

Description

Aladin

Coordinates

chr10:+:1600541..1605133

Molecular Weight (calculated)

48369.4 Da

IEP (calculated)

5.459

GRAVY (calculated)

-0.043

Length

445 amino acids

Sequence
(BLAST)

001: MPSFPPPGAV TICEINRDLV AVDALSDDRA KDAYGDVLGM VFAPIPFQPE ALLLASREPA APAADQVEPA DTVPTAGLAA TISDFFRRMV FPPLDPNLLE
101: EFDTQKVSWN PYKHCLAFVS GKNQVTVQDF EDSDAKEPCI LTNDHQTDVK AVEWRPNSGK MIAVACKGGI CLWSASYPGN VPFMKSGVTS SSFSAFPRGS
201: GGQWILVDVL RGSSAELVSA LCWKPDGRYL ASASCNSSSF TIWDVSQGLG TPIRRGLSNI SLVRWSPSGD YLLVAKFDGT FHFWETNTWT SEPWSSSNGY
301: VSGANWDPEG RVALLSFSNS TTLGSIHFSS KPPSLDAHLL PVELPEISSL IVSRGIEKLA WDASGERLAL SFRDGNEMYR GLIAIYDVRR SPLVSLSLVG
401: FIRGPGEGAK PLAFAFHSKF KQGPLLSVCW SSGWCCTYPL ILRPR

Best Arabidopsis Sequence Match ( AT3G56900.1 )
(BLAST)

001: MASFPHPGSV TVCEINRDLI TAQNLSDERA QETYGKVLGM VFSPVSFDST PSSLQENEGQ ENGDKASGES KGLVATLQMK VADSLKQILQ PTDVTLLSEI
101: DLQGVSWHQG KHIIAFISGA NQVTIRDYED KDEKEPCILT SDSQRNVKAL EWRPNGGKSL SIACRGGICI WAASYPGNMA LVRSGGSALR GSLSRGSGTR
201: WILVDFLRCQ NDEQISALSW SPCGRYLASA SYDSSSFTIW DVSQGAGTPI RRGLGGISML KWSPTGDYFF AARFDGTFCL WETNTWTSEP WSLSSGSGSV
301: TGAIWDPEGR FILISFSKSS TLGSVHFSSK PPSLDAHLLP VELPEIASLT GCEGIEKIAW DASGERLAVS YKGGDENYKG LIAIYDTRRT PIVSASLVGF
401: IRGPGENPKA LSFSFHDKFK QGPLLSVCWS TGFCCTYPLI FRSHVLP

Arabidopsis Description

AAASAladin [Source:UniProtKB/Swiss-Prot;Acc:Q8GWR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.