Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d023264_P004 | Maize | cytosol | 95.27 | 95.06 |
Os11t0132700-01 | Rice | cytosol, nucleus | 84.68 | 84.88 |
Os12t0129400-01 | Rice | cytosol | 84.46 | 84.65 |
TraesCS5B01G138600.2 | Wheat | cytosol | 82.66 | 83.03 |
TraesCS5D01G152200.1 | Wheat | cytosol | 82.21 | 82.58 |
TraesCS5A01G138500.1 | Wheat | cytosol | 81.31 | 82.42 |
HORVU5Hr1G045070.3 | Barley | plastid | 79.95 | 70.86 |
GSMUA_Achr8P26090_001 | Banana | cytosol | 65.77 | 66.06 |
Os12t0131300-01 | Rice | cytosol | 13.74 | 61.62 |
VIT_08s0040g00290.t01 | Wine grape | extracellular | 30.86 | 59.83 |
PGSC0003DMT400046078 | Potato | extracellular, plasma membrane | 61.49 | 56.06 |
AT3G56900.1 | Thale cress | cytosol | 55.63 | 55.26 |
Bra007281.1-P | Field mustard | cytosol | 52.7 | 52.94 |
CDX72100 | Canola | cytosol | 53.38 | 52.9 |
CDY27182 | Canola | cytosol | 52.48 | 52.71 |
KRG95023 | Soybean | cytosol, nucleus | 52.93 | 52.46 |
KRH66657 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 52.7 | 52.23 |
Solyc08g036600.1.1 | Tomato | nucleus | 21.17 | 46.31 |
Os12t0129650-01 | Rice | cytosol | 6.98 | 40.79 |
KRH37825 | Soybean | cytosol, endoplasmic reticulum, plastid, vacuole | 13.06 | 33.33 |
Protein Annotations
Gene3D:2.130.10.10 | MapMan:23.5.1.1.1.8 | UniProt:A0A1B6PAV8 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005737 |
GO:GO:0005783 | InterPro:IPR001680 | InterPro:IPR015943 | EnsemblPlants:KXG22856 | ProteinID:KXG22856 | ProteinID:KXG22856.1 |
PFAM:PF00400 | PFscan:PS50082 | PANTHER:PTHR14494 | SMART:SM00320 | EnsemblPlantsGene:SORBI_3008G017200 | SUPFAM:SSF50978 |
UniParc:UPI00081ACC9F | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr8:+:1411539..1416290
Molecular Weight (calculated)
48142.1 Da
IEP (calculated)
5.676
GRAVY (calculated)
-0.056
Length
444 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSFPPPGAV TICEINRDLV AADALSDARA KDAYGDVLGM VFAPIPFQPE ALLPSREPAA PAADQVEPAE TAPAPGLAAT ISEFFRRMVF PPLDPNLLEE
101: FDTQKVSWNP YKHCLAFVSG KNQVTVQDFE DSDAKEPCIL TSDHQTDVKA VEWRPNSGKM IAVACKGGIC LWSASYPGNV PFMKPGITSS SSSAFPRGSG
201: GQWILVDVLR GSSAELISAL CWKPDGRYLA SASCNSPSFT IWDVSQGLGT PIRRGLSNIS LVRWSPSGDY LLAAKFDGTF HFWETNTWTS EPWSSSNGYV
301: SGANWDPEGR VALLSFSNST TLGSIHFSSK PPSLDAHLLP VELPEIFSLI VSRGIEKLAW DASGERLALS FKDGNEMYRG LIAVYDVRRS PLISLSLVGF
401: IRGPGEGAKP LAFAFHSKFK QGPLLSVCWS SGWCCTYPLI LRSH
101: FDTQKVSWNP YKHCLAFVSG KNQVTVQDFE DSDAKEPCIL TSDHQTDVKA VEWRPNSGKM IAVACKGGIC LWSASYPGNV PFMKPGITSS SSSAFPRGSG
201: GQWILVDVLR GSSAELISAL CWKPDGRYLA SASCNSPSFT IWDVSQGLGT PIRRGLSNIS LVRWSPSGDY LLAAKFDGTF HFWETNTWTS EPWSSSNGYV
301: SGANWDPEGR VALLSFSNST TLGSIHFSSK PPSLDAHLLP VELPEIFSLI VSRGIEKLAW DASGERLALS FKDGNEMYRG LIAVYDVRRS PLISLSLVGF
401: IRGPGEGAKP LAFAFHSKFK QGPLLSVCWS SGWCCTYPLI LRSH
001: MASFPHPGSV TVCEINRDLI TAQNLSDERA QETYGKVLGM VFSPVSFDST PSSLQENEGQ ENGDKASGES KGLVATLQMK VADSLKQILQ PTDVTLLSEI
101: DLQGVSWHQG KHIIAFISGA NQVTIRDYED KDEKEPCILT SDSQRNVKAL EWRPNGGKSL SIACRGGICI WAASYPGNMA LVRSGGSALR GSLSRGSGTR
201: WILVDFLRCQ NDEQISALSW SPCGRYLASA SYDSSSFTIW DVSQGAGTPI RRGLGGISML KWSPTGDYFF AARFDGTFCL WETNTWTSEP WSLSSGSGSV
301: TGAIWDPEGR FILISFSKSS TLGSVHFSSK PPSLDAHLLP VELPEIASLT GCEGIEKIAW DASGERLAVS YKGGDENYKG LIAIYDTRRT PIVSASLVGF
401: IRGPGENPKA LSFSFHDKFK QGPLLSVCWS TGFCCTYPLI FRSHVLP
101: DLQGVSWHQG KHIIAFISGA NQVTIRDYED KDEKEPCILT SDSQRNVKAL EWRPNGGKSL SIACRGGICI WAASYPGNMA LVRSGGSALR GSLSRGSGTR
201: WILVDFLRCQ NDEQISALSW SPCGRYLASA SYDSSSFTIW DVSQGAGTPI RRGLGGISML KWSPTGDYFF AARFDGTFCL WETNTWTSEP WSLSSGSGSV
301: TGAIWDPEGR FILISFSKSS TLGSVHFSSK PPSLDAHLLP VELPEIASLT GCEGIEKIAW DASGERLAVS YKGGDENYKG LIAIYDTRRT PIVSASLVGF
401: IRGPGENPKA LSFSFHDKFK QGPLLSVCWS TGFCCTYPLI FRSHVLP
Arabidopsis Description
AAASAladin [Source:UniProtKB/Swiss-Prot;Acc:Q8GWR1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.