Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 2
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0129650-01 | Rice | cytosol | 50.51 | 65.79 |
| Os11t0132700-01 | Rice | cytosol, nucleus | 84.85 | 18.96 |
| Os12t0129400-01 | Rice | cytosol | 82.83 | 18.51 |
| Solyc08g036600.1.1 | Tomato | nucleus | 37.37 | 18.23 |
| TraesCS5B01G138600.2 | Wheat | cytosol | 71.72 | 16.06 |
| TraesCS5A01G138500.1 | Wheat | cytosol | 70.71 | 15.98 |
| TraesCS5D01G152200.1 | Wheat | cytosol | 69.7 | 15.61 |
| KXG22856 | Sorghum | cytosol | 61.62 | 13.74 |
| Zm00001d023264_P004 | Maize | cytosol | 61.62 | 13.71 |
| HORVU5Hr1G045070.3 | Barley | plastid | 56.57 | 11.18 |
| GSMUA_Achr8P26090_001 | Banana | cytosol | 45.45 | 10.18 |
| CDY27182 | Canola | cytosol | 40.4 | 9.05 |
| Bra007281.1-P | Field mustard | cytosol | 40.4 | 9.05 |
| CDX72100 | Canola | cytosol | 40.4 | 8.93 |
| AT3G56900.1 | Thale cress | cytosol | 39.39 | 8.72 |
| KRH66657 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 37.37 | 8.26 |
| KRG95023 | Soybean | cytosol, nucleus | 36.36 | 8.04 |
| PGSC0003DMT400046078 | Potato | extracellular, plasma membrane | 39.39 | 8.01 |
| KRH37825 | Soybean | cytosol, endoplasmic reticulum, plastid, vacuole | 5.05 | 2.87 |
| VIT_08s0040g00290.t01 | Wine grape | extracellular | 3.03 | 1.31 |
Protein Annotations
| EnsemblPlants:Os12t0131300-01 | EnsemblPlantsGene:Os12g0131300 | EntrezGene:9266576 | ProteinID:BAH95502.1 | ProteinID:BAT15747.1 | RefSeq:XP_015618243.1 |
| UniParc:UPI0001B66559 | UniProt:C7JA03 | MapMan:35.2 | : | : | : |
Description
Similar to cDNA, clone: J065154E06, full insert sequence. (Os12t0131300-01)
Coordinates
chr12:+:1513212..1515415
Molecular Weight (calculated)
10534.5 Da
IEP (calculated)
3.888
GRAVY (calculated)
0.230
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MPSFPPPGTV TICEINRDLV AADALSDDGA KDAYGDVLGM VFSPIPFQPD AIVATHEPPA VTEAAEIVPR TSLASTVAES FKQMLFPSCD FFLKDQCCV
001: MASFPHPGSV TVCEINRDLI TAQNLSDERA QETYGKVLGM VFSPVSFDST PSSLQENEGQ ENGDKASGES KGLVATLQMK VADSLKQILQ PTDVTLLSEI
101: DLQGVSWHQG KHIIAFISGA NQVTIRDYED KDEKEPCILT SDSQRNVKAL EWRPNGGKSL SIACRGGICI WAASYPGNMA LVRSGGSALR GSLSRGSGTR
201: WILVDFLRCQ NDEQISALSW SPCGRYLASA SYDSSSFTIW DVSQGAGTPI RRGLGGISML KWSPTGDYFF AARFDGTFCL WETNTWTSEP WSLSSGSGSV
301: TGAIWDPEGR FILISFSKSS TLGSVHFSSK PPSLDAHLLP VELPEIASLT GCEGIEKIAW DASGERLAVS YKGGDENYKG LIAIYDTRRT PIVSASLVGF
401: IRGPGENPKA LSFSFHDKFK QGPLLSVCWS TGFCCTYPLI FRSHVLP
101: DLQGVSWHQG KHIIAFISGA NQVTIRDYED KDEKEPCILT SDSQRNVKAL EWRPNGGKSL SIACRGGICI WAASYPGNMA LVRSGGSALR GSLSRGSGTR
201: WILVDFLRCQ NDEQISALSW SPCGRYLASA SYDSSSFTIW DVSQGAGTPI RRGLGGISML KWSPTGDYFF AARFDGTFCL WETNTWTSEP WSLSSGSGSV
301: TGAIWDPEGR FILISFSKSS TLGSVHFSSK PPSLDAHLLP VELPEIASLT GCEGIEKIAW DASGERLAVS YKGGDENYKG LIAIYDTRRT PIVSASLVGF
401: IRGPGENPKA LSFSFHDKFK QGPLLSVCWS TGFCCTYPLI FRSHVLP
Arabidopsis Description
AAASAladin [Source:UniProtKB/Swiss-Prot;Acc:Q8GWR1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.