Factsheet for AT4G33350.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75346	Canola	plastid	80.6	80.6
Bra011434.1-P	Field mustard	plastid	79.1	79.7
KRG99384	Soybean	plastid	41.04	70.51
KRH51981	Soybean	plastid	64.93	66.92
KRH61282	Soybean	nucleus	64.18	66.67
CDX68969	Canola	plastid	77.99	63.33
VIT_18s0001g10590.t01	Wine grape	plastid	64.55	62.45
Os06t0213200-01	Rice	cytosol, mitochondrion	12.31	56.9
PGSC0003DMT400020682	Potato	plastid	61.94	56.66
Solyc04g079000.2.1	Tomato	plastid	61.19	55.97
GSMUA_Achr6P30510_001	Banana	plastid	57.84	52.9
TraesCS7B01G076600.1	Wheat	plastid	51.87	51.67
TraesCS7D01G172300.1	Wheat	plastid	52.24	51.66
TraesCS7A01G171800.1	Wheat	plastid	51.87	51.1
GSMUA_Achr9P27070_001	Banana	plastid	25.75	50.74
Zm00001d044931_P001	Maize	plastid	52.24	50.0
EER89408	Sorghum	plastid	51.12	48.41
HORVU7Hr1G035680.1	Barley	cytosol	47.39	45.68
AT3G23710.1	Thale cress	cytosol, plastid	30.6	26.2

Protein Annotations

MapMan:23.1.3.6	Gene3D:3.40.1350.100	EntrezGene:829471	UniProt:A0A178UWE7	ProteinID:AEE86209.1	ProteinID:AEE86210.1
EMBL:AK118805	ArrayExpress:AT4G33350	EnsemblPlantsGene:AT4G33350	RefSeq:AT4G33350	TAIR:AT4G33350	RefSeq:AT4G33350-TAIR-G
EnsemblPlants:AT4G33350.1	TAIR:AT4G33350.1	EMBL:BT005417	ProteinID:CAB38793.1	ProteinID:CAB80052.1	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009507
GO:GO:0009536	GO:GO:0009941	GO:GO:0015031	GO:GO:0016020	GO:GO:0031972	RefSeq:NP_001190901.1
RefSeq:NP_195061.1	ProteinID:OAO97915.1	PFAM:PF04278	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0005052	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR33926	PANTHER:PTHR33926:SF2
UniProt:Q9SZB2	TIGRFAMs:TIGR00995	InterPro:Tic22	InterPro:Tic22-like	UniParc:UPI000000C642	SEG:seg

Description

TIC22Tic22-IV [Source:UniProtKB/TrEMBL;Acc:A0A178UWE7]

Coordinates

chr4:-:16064437..16066897

Molecular Weight (calculated)

30107.1 Da

IEP (calculated)

9.778

GRAVY (calculated)

-0.360

Length

268 amino acids

Sequence
(BLAST)

001: MESSVKPNPF LSFSSFIHHQ CTRFSSDLSA RIEDTKRFAE TLATRRFSLP TPPPFASVSQ SKSGTPTTTL SPSLVAKALA GTSVFTVSNT NNEFVLISDP
101: TGGKSIGLLC FRQEDAEAFL AQARLRRREL KTNAKVVPIT LDQVYLLKVE GISFRFLPDP IQIKNALELK SSGNKNGFDG VPVFQSELLV VRKKNRRYCP
201: VYFSKEDIER ELSKYTRASR GDQQIMVGSL EDVLRKMEMS EKNSGWEDVI FIPPGRSYAQ HMQDLIKE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.