Factsheet for HORVU7Hr1G035680.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G066520.2
HORVU1Hr1G071330.3
HORVU7Hr1G002080.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33350.1	HORVU1Hr1G071330.3	AT3G24140.1	21798944
AT4G33350.1	HORVU1Hr1G066520.2	AT3G59840.1	21798944
AT4G33350.1	HORVU7Hr1G002080.2	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0213200-01	Rice	cytosol, mitochondrion	17.99	86.21
TraesCS7B01G076600.1	Wheat	plastid	68.7	71.0
TraesCS7D01G172300.1	Wheat	plastid	68.7	70.48
TraesCS7A01G171800.1	Wheat	plastid	68.35	69.85
Zm00001d044931_P001	Maize	plastid	65.11	64.64
EER89408	Sorghum	plastid	64.75	63.6
GSMUA_Achr9P27070_001	Banana	plastid	28.78	58.82
KRG99384	Soybean	plastid	30.94	55.13
KRH61282	Soybean	nucleus	47.84	51.55
KRH51981	Soybean	plastid	48.2	51.54
GSMUA_Achr6P30510_001	Banana	plastid	53.6	50.85
CDX75346	Canola	plastid	46.4	48.13
Bra011434.1-P	Field mustard	plastid	46.04	48.12
VIT_18s0001g10590.t01	Wine grape	plastid	47.48	47.65
AT4G33350.1	Thale cress	plastid	45.68	47.39
PGSC0003DMT400020682	Potato	plastid	48.2	45.73
Solyc04g079000.2.1	Tomato	plastid	47.84	45.39
CDX68969	Canola	plastid	45.32	38.18
HORVU3Hr1G071890.1	Barley	endoplasmic reticulum, mitochondrion, plastid, vacuole	27.7	22.25

Protein Annotations

EnsemblPlants:HORVU7Hr1G035680.1	EnsemblPlantsGene:HORVU7Hr1G035680	Gene3D:3.40.1350.100	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009941
GO:GO:0015031	InterPro:Tic22-like	ncoils:Coil	PANTHER:PTHR33926	PANTHER:PTHR33926:SF2	PFAM:PF04278
SEG:seg	UniParc:UPI000B485044	UniProt:A0A287W1N8	MapMan:23.1.3.6	:	:

Description

No Description!

Coordinates

chrchr7H:+:79792143..79796628

Molecular Weight (calculated)

22054.0 Da

IEP (calculated)

10.148

GRAVY (calculated)

-0.135

Length

278 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ARALTGTPVF TVCNSSNEFV
101: LVSDPATGLR SLGLLCFRSE DADALLSHVR TRQPVLGKGA KVVPITLDQV YMLKAEGIAF RFLPDPLQIK NALQLKSGLT GFDGVPVFQS DLLVVKKQKK
201: RYCPVYFQKE DIERELRKAS KSSKGSALSK QIMVGSLEDV LKKMEINDRN SGWDDLIFIP PGKSLNQHIN EIMFRKKT

Best Arabidopsis Sequence Match ( AT4G33350.1 )
(BLAST)

001: MESSVKPNPF LSFSSFIHHQ CTRFSSDLSA RIEDTKRFAE TLATRRFSLP TPPPFASVSQ SKSGTPTTTL SPSLVAKALA GTSVFTVSNT NNEFVLISDP
101: TGGKSIGLLC FRQEDAEAFL AQARLRRREL KTNAKVVPIT LDQVYLLKVE GISFRFLPDP IQIKNALELK SSGNKNGFDG VPVFQSELLV VRKKNRRYCP
201: VYFSKEDIER ELSKYTRASR GDQQIMVGSL EDVLRKMEMS EKNSGWEDVI FIPPGRSYAQ HMQDLIKE

Arabidopsis Description

TIC22Tic22-IV [Source:UniProtKB/TrEMBL;Acc:A0A178UWE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.