Factsheet for HORVU3Hr1G071890.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid, vacuole

Predictor Summary:

plastid 2
endoplasmic reticulum 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, mitochondrion, plastid, vacuole
Any Predictor:	endoplasmic reticulum, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
TargetP:	mitochondrion
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G290700.1	Wheat	plastid	66.76	82.5
TraesCS3D01G290500.1	Wheat	plastid	67.05	81.12
EER96244	Sorghum	plastid	54.62	65.4
Zm00001d019404_P001	Maize	plastid	51.73	62.81
Os07t0290800-01	Rice	plastid	52.6	62.33
Solyc09g092530.2.1	Tomato	plastid	34.1	44.87
PGSC0003DMT400056320	Potato	plastid	34.39	44.74
KRH58822	Soybean	cytosol	31.5	43.08
VIT_05s0062g00220.t01	Wine grape	cytosol	35.26	41.64
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	23.41	40.5
KRH42720	Soybean	extracellular, plasma membrane	21.39	37.37
Bra028338.1-P	Field mustard	plastid	32.66	36.81
CDY18095	Canola	plastid	32.66	36.81
CDY66637	Canola	nucleus, plastid	32.66	35.76
AT3G23710.1	Thale cress	cytosol, plastid	32.08	35.46
HORVU7Hr1G035680.1	Barley	cytosol	22.25	27.7

Protein Annotations

EnsemblPlants:HORVU3Hr1G071890.1	EnsemblPlantsGene:HORVU3Hr1G071890	Gene3D:3.40.1350.100	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009536	GO:GO:0015031	InterPro:Tic22-like
PANTHER:PTHR33926	PANTHER:PTHR33926:SF1	PFAM:PF04278	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI000B4787B6
UniProt:A0A287LLG1	MapMan:23.1.3.6	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:543464625..543470426

Molecular Weight (calculated)

37095.6 Da

IEP (calculated)

9.935

GRAVY (calculated)

-0.128

Length

346 amino acids

Sequence
(BLAST)

001: VGVGRPENSF QNPCARGLVV LSVLLTSSLL SISPPATAMP FDFPWLNKAA STPTPTPTPN PNPSKPNNPN PFLPIQTHLT SFLSSLPLPR AVAPPWARIP
101: SPSPSAALPV AEIEDRLAGV PVYALANSAQ EFILVSKTHR GGGGDAGGGV GGSARHPPAL GMLCFRREDA NMLLAQMGDD MRAGSTVVPV ALNKVVQLKS
201: DGVAFRFLPD PSQVANAIKL MQDGGEFVNE GFPGVPVFQS RSLVLRNDNK RYRPVFFRKE DLDKSLHRAS SDQQKPIPAV RIGDTQVSSL EDIITSMKGI
301: APPRNGMMPF LFLQVSTSLL AQSHHPSTSR SFCTLRVASW HCLENS

Best Arabidopsis Sequence Match ( AT3G23710.1 )
(BLAST)

001: MNSNIFPPSK QQNELNNIQQ SFSNLQSQCS NLLLNVSQTL NPLFNANTNN NKPNIFSALN SFRDQAKQAL DSRISRFNSG KAPVWARISD DGGGARAQVT
101: VPIRGSGKGL SADAIEERLA GVPVYALSNS NEEFVLVSGT SSGKSLGLLF CKEEDAETLL KEMKSMDPRM RKEGSKVVAL ALSKVFQLKV NGVAFRLIPE
201: STQVKNALKE RKTAGIDDDD FHGVPVFQSK SLILRSENMS YRPVFFRKED LEKSLIRASS QQNRLNPALK PGDIQVAVFE DIVKGMREST TSNWDDIVFI
301: PPGFEVSTEQ TQE

Arabidopsis Description

TIC22LTic22-III [Source:UniProtKB/TrEMBL;Acc:A0A178V7Q4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.