Factsheet for TraesCS3D01G290500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G290700.1	Wheat	plastid	86.01	87.86
EER96244	Sorghum	plastid	71.68	70.93
Os07t0290800-01	Rice	plastid	71.33	69.86
Zm00001d019404_P001	Maize	plastid	68.53	68.77
HORVU3Hr1G071890.1	Barley	endoplasmic reticulum, mitochondrion, plastid, vacuole	81.12	67.05
Solyc09g092530.2.1	Tomato	plastid	46.5	50.57
PGSC0003DMT400056320	Potato	plastid	46.85	50.38
KRH58822	Soybean	cytosol	41.61	47.04
VIT_05s0062g00220.t01	Wine grape	cytosol	46.85	45.73
KRH42720	Soybean	extracellular, plasma membrane	29.37	42.42
Bra028338.1-P	Field mustard	plastid	43.36	40.39
CDY18095	Canola	plastid	43.36	40.39
CDY66637	Canola	nucleus, plastid	43.36	39.24
AT3G23710.1	Thale cress	cytosol, plastid	42.31	38.66
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	26.22	37.5
TraesCS7D01G172300.1	Wheat	plastid	34.62	36.53

Protein Annotations

EnsemblPlants:TraesCS3D01G290500.1	EnsemblPlantsGene:TraesCS3D01G290500	Gene3D:3.40.1350.100	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009536	GO:GO:0015031	InterPro:Tic22-like
PANTHER:PTHR33926	PANTHER:PTHR33926:SF1	PFAM:PF04278	SEG:seg	MapMan:23.1.3.6	:

Description

No Description!

Coordinates

chr3D:+:400681717..400693518

Molecular Weight (calculated)

30886.8 Da

IEP (calculated)

6.682

GRAVY (calculated)

-0.222

Length

286 amino acids

Sequence
(BLAST)

001: MPFDFPWLNK AASTSTPNPS LSKPNNPNPF LPIQTHLTSF LSSLPLPRAI APPWARIPSP SSSAALPVAE IEDRLAGVPV YALANSAQEF MLVSKTHRGG
101: GGDVAGGVGG SARHPPALGM LCFRREDADM LLAQMDDDMR AGSTVVPVAL NKVIQLKSDG VAFRFLPDPS QVANAIKLMQ DGGEFLNEGF PGVPVFQSRS
201: LVLRNDNKRY RPVFFRKEDL DKSLHRASSD QQNPIPAVRI GDTQVCSLED IITSMKDSSS SKWDDAVFVP PGFDIAIGSE PSHLNK

Best Arabidopsis Sequence Match ( AT3G23710.1 )
(BLAST)

001: MNSNIFPPSK QQNELNNIQQ SFSNLQSQCS NLLLNVSQTL NPLFNANTNN NKPNIFSALN SFRDQAKQAL DSRISRFNSG KAPVWARISD DGGGARAQVT
101: VPIRGSGKGL SADAIEERLA GVPVYALSNS NEEFVLVSGT SSGKSLGLLF CKEEDAETLL KEMKSMDPRM RKEGSKVVAL ALSKVFQLKV NGVAFRLIPE
201: STQVKNALKE RKTAGIDDDD FHGVPVFQSK SLILRSENMS YRPVFFRKED LEKSLIRASS QQNRLNPALK PGDIQVAVFE DIVKGMREST TSNWDDIVFI
301: PPGFEVSTEQ TQE

Arabidopsis Description

TIC22LTic22-III [Source:UniProtKB/TrEMBL;Acc:A0A178V7Q4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.