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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH58822 Soybean cytosol 80.3 62.85
Solyc09g092530.2.1 Tomato plastid 54.04 40.68
PGSC0003DMT400056320 Potato plastid 53.54 39.85
VIT_05s0062g00220.t01 Wine grape cytosol 55.05 37.2
Zm00001d019404_P001 Maize plastid 47.47 32.98
CDY18095 Canola plastid 50.51 32.57
Bra028338.1-P Field mustard plastid 50.51 32.57
EER96244 Sorghum plastid 46.97 32.18
CDY66637 Canola nucleus, plastid 51.01 31.96
Os07t0290800-01 Rice plastid 46.46 31.51
TraesCS3A01G290700.1 Wheat plastid 43.43 30.71
AT3G23710.1 Thale cress cytosol, plastid 48.48 30.67
TraesCS3D01G290500.1 Wheat plastid 42.42 29.37
KRH61282 Soybean nucleus 32.32 24.81
KRH51981 Soybean plastid 32.32 24.62
KRG99384 Soybean plastid 18.18 23.08
GSMUA_AchrUn_... Banana mitochondrion, plastid 21.72 21.5
HORVU3Hr1G071890.1 Barley endoplasmic reticulum, mitochondrion, plastid, vacuole 37.37 21.39
Protein Annotations
EMBL:ACUP02004823EnsemblPlants:KRH42720EnsemblPlantsGene:GLYMA_08G107200Gene3D:3.40.1350.100GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0015031GO:GO:0016020GO:GO:0016021InterPro:Tic22-likencoils:Coil
PANTHER:PTHR33926PANTHER:PTHR33926:SF1PFAM:PF04278ProteinID:KRH42720ProteinID:KRH42720.1SEG:seg
TMHMM:TMhelixUniParc:UPI0006ED8EDDUniProt:A0A0R0IK61MapMan:23.1.3.6::
Description
hypothetical protein
Coordinates
chr8:+:8241428..8244541
Molecular Weight (calculated)
22065.6 Da
IEP (calculated)
8.732
GRAVY (calculated)
-0.037
Length
198 amino acids
Sequence
(BLAST)
001: VSLGLGLFLF CFSKDDAEAL LSQVTLIDPH ARQGSKVVPV ALNKVLPLSL SVSVLYFSLA FGLLCFLLQV FQLKVNSVAF RLIPEFSQVK NALKEREKSG
101: FASSGFSGVP VFQSRNLILK SQSKRFRPLF SRKEDLENTL KSAAREQNKL NSTMRKGDIQ VATLEDVIKE MKENSTSNWD DVIFIPPGFD VSDDSNEQ
Best Arabidopsis Sequence Match ( AT3G23710.1 )
(BLAST)
001: MNSNIFPPSK QQNELNNIQQ SFSNLQSQCS NLLLNVSQTL NPLFNANTNN NKPNIFSALN SFRDQAKQAL DSRISRFNSG KAPVWARISD DGGGARAQVT
101: VPIRGSGKGL SADAIEERLA GVPVYALSNS NEEFVLVSGT SSGKSLGLLF CKEEDAETLL KEMKSMDPRM RKEGSKVVAL ALSKVFQLKV NGVAFRLIPE
201: STQVKNALKE RKTAGIDDDD FHGVPVFQSK SLILRSENMS YRPVFFRKED LEKSLIRASS QQNRLNPALK PGDIQVAVFE DIVKGMREST TSNWDDIVFI
301: PPGFEVSTEQ TQE
Arabidopsis Description
TIC22LTic22-III [Source:UniProtKB/TrEMBL;Acc:A0A178V7Q4]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.