Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42720 | Soybean | extracellular, plasma membrane | 62.85 | 80.3 |
| Solyc09g092530.2.1 | Tomato | plastid | 56.13 | 53.99 |
| PGSC0003DMT400056320 | Potato | plastid | 55.73 | 53.01 |
| VIT_05s0062g00220.t01 | Wine grape | cytosol | 58.89 | 50.85 |
| Bra028338.1-P | Field mustard | plastid | 54.94 | 45.28 |
| CDY18095 | Canola | plastid | 54.94 | 45.28 |
| Zm00001d019404_P001 | Maize | plastid | 50.99 | 45.26 |
| EER96244 | Sorghum | plastid | 50.99 | 44.64 |
| CDY66637 | Canola | nucleus, plastid | 55.34 | 44.3 |
| Os07t0290800-01 | Rice | plastid | 50.99 | 44.18 |
| AT3G23710.1 | Thale cress | cytosol, plastid | 54.15 | 43.77 |
| TraesCS3A01G290700.1 | Wheat | plastid | 47.43 | 42.86 |
| TraesCS3D01G290500.1 | Wheat | plastid | 47.04 | 41.61 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 31.62 | 40.0 |
| KRG99384 | Soybean | plastid | 19.76 | 32.05 |
| HORVU3Hr1G071890.1 | Barley | endoplasmic reticulum, mitochondrion, plastid, vacuole | 43.08 | 31.5 |
| KRH61282 | Soybean | nucleus | 32.02 | 31.4 |
| KRH51981 | Soybean | plastid | 32.02 | 31.15 |
Protein Annotations
| EMBL:ACUP02003292 | EnsemblPlants:KRH58822 | EnsemblPlantsGene:GLYMA_05G150300 | EntrezGene:100811136 | Gene3D:3.40.1350.100 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Tic22-like |
| PANTHER:PTHR33926 | PANTHER:PTHR33926:SF1 | PFAM:PF04278 | ProteinID:KRH58822 | ProteinID:KRH58822.1 | UniParc:UPI00023396D9 |
| UniProt:I1K3Q6 | MapMan:23.1.3.6 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:34417793..34423285
Molecular Weight (calculated)
28241.7 Da
IEP (calculated)
8.727
GRAVY (calculated)
-0.372
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNFDGFQKA LAEFQGRCST LLGSLTRLQP NRARPPWARI AQPWGGRPMA MTVEAIEERL EGIPVYALSN ASEEFLLVSG SSSGKNLGLF CFNKDDAEAL
101: LNQVTLIDPH ARQGSKVVPV ALNKVFQLKV NGVAFRLIPE FSQVKNALQE REKSGFASSG FSGVPVFQSR SLILKSQNKR FRPLFFRKED LENTLKSAAR
201: EQNKLNPTMR KGDIQVATLE DVIKEMKENS TSNWDDVIFI PPGFDVSDDS NEQ
101: LNQVTLIDPH ARQGSKVVPV ALNKVFQLKV NGVAFRLIPE FSQVKNALQE REKSGFASSG FSGVPVFQSR SLILKSQNKR FRPLFFRKED LENTLKSAAR
201: EQNKLNPTMR KGDIQVATLE DVIKEMKENS TSNWDDVIFI PPGFDVSDDS NEQ
001: MNSNIFPPSK QQNELNNIQQ SFSNLQSQCS NLLLNVSQTL NPLFNANTNN NKPNIFSALN SFRDQAKQAL DSRISRFNSG KAPVWARISD DGGGARAQVT
101: VPIRGSGKGL SADAIEERLA GVPVYALSNS NEEFVLVSGT SSGKSLGLLF CKEEDAETLL KEMKSMDPRM RKEGSKVVAL ALSKVFQLKV NGVAFRLIPE
201: STQVKNALKE RKTAGIDDDD FHGVPVFQSK SLILRSENMS YRPVFFRKED LEKSLIRASS QQNRLNPALK PGDIQVAVFE DIVKGMREST TSNWDDIVFI
301: PPGFEVSTEQ TQE
101: VPIRGSGKGL SADAIEERLA GVPVYALSNS NEEFVLVSGT SSGKSLGLLF CKEEDAETLL KEMKSMDPRM RKEGSKVVAL ALSKVFQLKV NGVAFRLIPE
201: STQVKNALKE RKTAGIDDDD FHGVPVFQSK SLILRSENMS YRPVFFRKED LEKSLIRASS QQNRLNPALK PGDIQVAVFE DIVKGMREST TSNWDDIVFI
301: PPGFEVSTEQ TQE
Arabidopsis Description
TIC22LTic22-III [Source:UniProtKB/TrEMBL;Acc:A0A178V7Q4]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.