Factsheet for TraesCS7B01G076600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G290800.1
TraesCS1A01G319500.1
TraesCS1B01G300100.1
TraesCS1B01G331800.1
TraesCS1D01G289400.1
TraesCS1D01G319300.1
TraesCS7A01G019000.1
TraesCS7D01G016100.1
TraesCSU01G065800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33350.1	TraesCS1A01G290800.1	AT3G24140.1	21798944
AT4G33350.1	TraesCS1B01G300100.1	AT3G24140.1	21798944
AT4G33350.1	TraesCS1D01G289400.1	AT3G24140.1	21798944
AT4G33350.1	TraesCS1A01G319500.1	AT3G59840.1	21798944
AT4G33350.1	TraesCS1B01G331800.1	AT3G59840.1	21798944
AT4G33350.1	TraesCS1D01G319300.1	AT3G59840.1	21798944
AT4G33350.1	TraesCS7A01G019000.1	AT4G25660.1	21798944
AT4G33350.1	TraesCS7D01G016100.1	AT4G25660.1	21798944
AT4G33350.1	TraesCSU01G065800.1	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G172300.1	Wheat	plastid	94.42	93.73
TraesCS7A01G171800.1	Wheat	plastid	93.68	92.65
Os06t0213200-01	Rice	cytosol, mitochondrion	19.7	91.38
EER89408	Sorghum	plastid	83.64	79.51
Zm00001d044931_P001	Maize	plastid	81.78	78.57
HORVU7Hr1G035680.1	Barley	cytosol	71.0	68.7
GSMUA_Achr6P30510_001	Banana	plastid	67.29	61.77
GSMUA_Achr9P27070_001	Banana	plastid	30.86	61.03
KRG99384	Soybean	plastid	34.57	59.62
KRH61282	Soybean	nucleus	54.65	56.98
KRH51981	Soybean	plastid	55.02	56.92
Bra011434.1-P	Field mustard	plastid	53.9	54.51
CDX75346	Canola	plastid	54.28	54.48
VIT_18s0001g10590.t01	Wine grape	plastid	55.76	54.15
AT4G33350.1	Thale cress	plastid	51.67	51.87
Solyc04g079000.2.1	Tomato	plastid	55.76	51.19
PGSC0003DMT400020682	Potato	plastid	55.39	50.85
CDX68969	Canola	plastid	52.42	42.73

Protein Annotations

EnsemblPlants:TraesCS7B01G076600.1	EnsemblPlantsGene:TraesCS7B01G076600	Gene3D:3.40.1350.100	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009941
GO:GO:0015031	InterPro:Tic22-like	PANTHER:PTHR33926	PANTHER:PTHR33926:SF2	PFAM:PF04278	SEG:seg
MapMan:23.1.3.6	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:86225778..86229406

Molecular Weight (calculated)

28851.9 Da

IEP (calculated)

9.669

GRAVY (calculated)

-0.125

Length

269 amino acids

Sequence
(BLAST)

001: MPPPSSYLPL AAAPMSDPSP SPPPNPLAAA SSFLQHHLSS LASRFAAPRP ALAAARPPGP HGAAAQPLAL GPDEVARALT GTPVFTVCNS SNEFVLVSDP
101: ATGLRSLGLL CFRSEDADAL LSHVRTRQPV LGKGAKVVPI TLDQVYMLKA EGIAFRFLPD PLQIKNALQL KSGLTGFDGV PVFQSDLLVV KKQKKRYCPV
201: YFQKEDIERE LRKASKSSKG SALSKQIMVG SLEDVLKKME INDRNSGWDD LIFIPPGKSL NQHINEVSA

Best Arabidopsis Sequence Match ( AT4G33350.1 )
(BLAST)

001: MESSVKPNPF LSFSSFIHHQ CTRFSSDLSA RIEDTKRFAE TLATRRFSLP TPPPFASVSQ SKSGTPTTTL SPSLVAKALA GTSVFTVSNT NNEFVLISDP
101: TGGKSIGLLC FRQEDAEAFL AQARLRRREL KTNAKVVPIT LDQVYLLKVE GISFRFLPDP IQIKNALELK SSGNKNGFDG VPVFQSELLV VRKKNRRYCP
201: VYFSKEDIER ELSKYTRASR GDQQIMVGSL EDVLRKMEMS EKNSGWEDVI FIPPGRSYAQ HMQDLIKE

Arabidopsis Description

TIC22Tic22-IV [Source:UniProtKB/TrEMBL;Acc:A0A178UWE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.