Factsheet for AT4G40000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69365	Canola	cytosol	75.73	81.91
Bra011816.1-P	Field mustard	cytosol, mitochondrion	74.2	81.37
CDY68255	Canola	cytosol, mitochondrion	74.2	81.37
AT2G22400.1	Thale cress	cytosol	68.2	66.09
KRH59299	Soybean	cytosol	25.93	63.84
KRH43150	Soybean	nucleus	57.09	54.51
KRH31314	Soybean	cytosol	55.43	53.19
VIT_07s0191g00040.t01	Wine grape	nucleus	56.83	53.17
Solyc05g051520.2.1	Tomato	nucleus	53.64	51.03
Solyc11g010110.1.1	Tomato	nucleus	55.68	49.66
PGSC0003DMT400041672	Potato	nucleus	55.68	49.66
GSMUA_Achr7P19120_001	Banana	nucleus	52.11	49.04
KRH59300	Soybean	mitochondrion	28.61	46.19
TraesCS5B01G247600.1	Wheat	cytosol, mitochondrion	50.96	45.7
TraesCS5D01G256900.1	Wheat	cytosol	50.96	45.7
TraesCS5A01G249700.1	Wheat	cytosol	50.7	45.42
EER96904	Sorghum	nucleus	50.45	45.19
Zm00001d020810_P002	Maize	nucleus	50.7	44.66
Os09t0471900-01	Rice	nucleus	49.94	44.43
KXG25732	Sorghum	mitochondrion	46.36	42.96
KRG97553	Soybean	extracellular, plasma membrane	22.48	42.82
Zm00001d031265_P029	Maize	mitochondrion	44.96	42.67
TraesCS4D01G060100.1	Wheat	plastid	44.83	42.34
TraesCS4A01G254100.3	Wheat	mitochondrion	44.7	42.07
TraesCS4B01G060400.1	Wheat	mitochondrion, plastid	44.19	41.54
KRH45277	Soybean	cytosol	5.24	37.27
AT4G17590.1	Thale cress	cytosol	4.21	16.42
AT5G55920.1	Thale cress	nucleus	13.15	15.1
AT5G26180.3	Thale cress	plastid	10.47	14.46
AT4G26600.5	Thale cress	plastid	12.64	14.1
AT3G13180.1	Thale cress	plastid	9.32	13.96
HORVU6Hr1G034260.1	Barley	extracellular	0.51	5.8

Protein Annotations

MapMan:16.6.7.8	EntrezGene:830161	ProteinID:AEE87151.1	ProteinID:ANM67999.1	ArrayExpress:AT4G40000	EnsemblPlantsGene:AT4G40000
RefSeq:AT4G40000	TAIR:AT4G40000	RefSeq:AT4G40000-TAIR-G	EnsemblPlants:AT4G40000.1	TAIR:AT4G40000.1	Unigene:At.48966
UniProt:F4JJ52	InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0001510	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016428	GO:GO:0016740	GO:GO:0030488	GO:GO:0032259	InterPro:IPR001678
InterPro:MeTrfase_RsmB/NOP2	RefSeq:NP_001329785.1	RefSeq:NP_195710.3	PFAM:PF01189	PO:PO:0000013	PO:PO:0000037
PO:PO:0000084	PO:PO:0000293	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007103	PO:PO:0007115	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009052	PO:PO:0020038	PO:PO:0020100	PO:PO:0025022
PRINTS:PR02008	PRINTS:PR02011	ScanProsite:PS01153	PFscan:PS51686	PANTHER:PTHR22808	PANTHER:PTHR22808:SF14
InterPro:RCMT	InterPro:RCMT_NCL1	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000034F1A9	SEG:seg

Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JJ52]

Coordinates

chr4:-:18543893..18547556

Molecular Weight (calculated)

88188.2 Da

IEP (calculated)

6.905

GRAVY (calculated)

-0.462

Length

783 amino acids

Sequence
(BLAST)

001: MGRGRRHRGS TSKRNQIENS NDDNVRKPLK SEASFDSNNL QKPICSNLHF EEYYKEQRIV KAQEWDSFME FLRKPLPAAF RVYSNGQFCD EIRLKLENDF
101: MISLQAEAIE SGELEAIKPL PWYPKNLAWH SNFSRKEIRK NQTLERFHEF LKLETEAGNM TRQESVSMVP PLFLDVHPDH FVLDMCAAPG SKTFQLLEII
201: HESSEPGSLP NGMVVANDVD YKRSNLLIHQ TKRTCTTNLM VTNNEGQHFP SCNTKRTLSV ASETNPHPID QLLFDRVLCD VPCSGDGTLR KAPDIWRRWN
301: SGSGNGLHSL QVVLAMRGLS LLKVGGRMVY STCSMNPIED EAVVAEILRR CGCSVELVDV SDKLPELIRR PGLTKWKVHD RGGWYRSYKD VPKSQRDGVL
401: RSMFPSGKSD KDSSGGKNSY EEMASISSDE SAEEVCDLPL ELCMRILPHD QNTGGFFIAV LHKVSPLPDF QEKVTQKRNL STRNNINSSE KSSSYEAVSD
501: TVVTKPEEGT EEIVLEATVS ENGFEPPEME STWNEGIVEL AQKLDDIEGK REVPSMQGKW KGLYPVVFLR DQTGINGIKT FYGIKDESFP LYGHLVTRNS
601: DISSHGNVKR IYYVSKAVKN VLELNFAVGK PLKISSVGLK MFEKQSAKEC EANCCSFRIT SEGLPVILPY MTKQILYATM ADFKNLLQHK SIKFLDFIHP
701: QIGEKAAELA LGSCVMVLVD DSQLGSEQFK VNSSTIAIGC WKGKASLTVM VTTVDCHQLI QRLSDRSKEK EKAENCFKTA ETA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.