CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020810_P002	Maize	nucleus	94.05	92.46
Os09t0471900-01	Rice	nucleus	84.21	83.64
TraesCS5D01G256900.1	Wheat	cytosol	77.46	77.55
TraesCS5B01G247600.1	Wheat	cytosol, mitochondrion	77.35	77.43
TraesCS5A01G249700.1	Wheat	cytosol	77.35	77.35
HORVU5Hr1G070390.9	Barley	cytosol, nucleus, plastid	73.46	72.79
KRH59299	Soybean	cytosol	24.83	68.24
GSMUA_Achr7P19120_001	Banana	nucleus	57.09	59.98
KXG25732	Sorghum	mitochondrion	56.52	58.46
KRH43150	Soybean	nucleus	52.63	56.1
VIT_07s0191g00040.t01	Wine grape	nucleus	53.66	56.03
CDX89460	Canola	nucleus	49.77	55.63
CDY15291	Canola	nucleus	9.84	55.48
CDY68255	Canola	cytosol, mitochondrion	45.31	55.46
Bra011816.1-P	Field mustard	cytosol, mitochondrion	45.31	55.46
Bra030242.1-P	Field mustard	nucleus	49.89	54.98
CDY25593	Canola	nucleus	49.54	54.6
KRH31314	Soybean	cytosol	50.92	54.53
CDX69365	Canola	cytosol	45.08	54.42
CDX76928	Canola	nucleus	50.0	54.15
CDY13765	Canola	nucleus	49.89	53.83
Bra038528.1-P	Field mustard	nucleus	49.89	53.83
AT2G22400.1	Thale cress	cytosol	49.2	53.22
Solyc05g051520.2.1	Tomato	nucleus	49.66	52.73
Solyc11g010110.1.1	Tomato	nucleus	51.37	51.14
PGSC0003DMT400041672	Potato	nucleus	51.26	51.03
AT4G40000.1	Thale cress	nucleus	45.19	50.45
KRH59300	Soybean	mitochondrion	25.63	46.19
KRG97553	Soybean	extracellular, plasma membrane	21.17	45.01
KRH45277	Soybean	cytosol	4.92	39.09
KXG29808	Sorghum	plastid	8.7	15.29
KXG30856	Sorghum	nucleus, plastid	11.67	14.74
OQU89660	Sorghum	plastid	8.24	12.54

Protein Annotations

MapMan:16.6.7.8	EntrezGene:8063738	UniProt:C5X327	EnsemblPlants:EER96904	ProteinID:EER96904	ProteinID:EER96904.1
InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0001510	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016428	GO:GO:0016740	GO:GO:0030488	GO:GO:0032259	InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2
PFAM:PF01189	PRINTS:PR02008	PRINTS:PR02011	ScanProsite:PS01153	PFscan:PS51686	PANTHER:PTHR22808
PANTHER:PTHR22808:SF14	MetaCyc:PWY-6825	InterPro:RCMT	InterPro:RCMT_NCL1	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3002G234300
SUPFAM:SSF53335	unigene:Sbi.1933	UniParc:UPI0001A836A2	RefSeq:XP_002460383.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:62516811..62523942

Molecular Weight (calculated)

98197.9 Da

IEP (calculated)

5.448

GRAVY (calculated)

-0.596

Length

874 amino acids

Sequence
(BLAST)

001: MGGGRKRGRT QRRHFKQGRE NVWKHNPQRP PAGEGGEGRE GNPSWQPFAT ENPSFEEYYK EQQIVPEEEW DSFMSMLRKP LPATFRINAS CQFYQDICSQ
101: LENDFRKSLE TEVTDEHEED AIRPLPWYPG NLAWHLNFSR MQLRRNQALE SFHEFLKREN EVGNITRQEA VSMVPPLFLN VQPDHHILDM CAAPGSKTFQ
201: LLEMIHQSTK PGVLPNALVV ANDVDVQRCN LLIHQTKRMC TANLIVTNHE AQNFPGCNLA KFCSEVCMDE AKLQRLEFDR VLCDVPCSGD GTVRKAPDMW
301: RKWNAGMGNG LHRLQVEIAM RGMGLLKVGG RMVYSTCSMN PVENEAVVAE ILRRCGDSVE LLDVSNELPE LARRPGLSTW KVRDRGSWFG VHEDVPRYRK
401: HVISPSMFPS GKGSKDSLTV SSSVEVNTDV ADADMKDSTD IGEGEQETNI TIDDSDNADN LKTKEGTKVD CEFGEVTASS YKKSNSTPIR TEHSDYPLHR
501: CMRIVAHDQN SGAFFIAVLH KLSPLNENQV IDGVKGEQNI SKDKTEKLEK DLGSDKASSE ENIVHHEVID NTNVLDGEQN EDRDNKSSKD KSSEDSKVNV
601: NEAEKGQAGT RDRRRQQNQG RWRGVDPVIF FKDEATVKSI VSFYGIMDSF PLEGHLVTRN PDASHVKRIY YVSKSVQDAL QLNIKVGERL KITSLGLKIF
701: ERQSSKEGSP CTFRLSSEGL PLLLPYITKQ ILYASAIDFQ HLLQYRTIKF PDFVDAKFGE EASALLPGCC VVVLREGHQD IGSIATDPSA IAIVCWKGKT
801: NLCVMVSPLD GKELLERISL RFGLKIPKGD KEKPSEEIAG SDELLDCATE VDDQECFPES KASDIEISDA KDAD

Best Arabidopsis Sequence Match ( AT2G22400.1 )
(BLAST)

001: MGRGGRHRGR TQRKDFKESR ENVWKRPKSD ASVDGSDNAV PEQKPTWEPI VTVNPNFEEY YKKQGIVKAE EWDLFMEILR KPLPAAFRVN SNGQFCDEII
101: SILENDFMKS LQAEAIEGGE LEAIKPLPWY PKNLAWHSNF SRKEIRKNQT LERFHEFLKL ENEVGNITRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT
201: FQLLEIIHEA SEPGSLPNGL VVANDVDFKR SNLLIHQTKR MCTSNLIVTN HEGQQFPGCR LNKSRASEKG ISENMPINQL AFDRVLCDVP CSGDGTLRKA
301: PDIWRKWNSG MGNGLHSLQI ILAMRGLSLL KVGGKMIYST CSMNPVEDEA VVAEILRRCG DSVELLDVSD KLPELIRRPG LKAWKVRDKG GWFTSYKDVP
401: QNRRGGVLVS MFPSGKYLKD STETTEKNEN GDVNGCEDGL KETDISVVDA TPEEQAEEVS DLPLERCMRI IPHDQNTGAF FIAVLQKKSP LPEFQEKPNT
501: KRNSTAKSTD STEKSPSKES VVTVDAGVPD ESAVEKVIEA DSNIEKNDSL EPEKKITEGE SITEDKEANS SNAGGKRKVP MQGKWKGFDP VVFVKDETVI
601: NGIKEFYGIK DESFPLHGHL VARNTDTSSV KRIYYVSKSV KEVLQLNFAV GQQLKIASVG LKMFERQSAK EGSSTLCPFR ISSEGLPVIL PYITKQVLYT
701: PMADFKLLLQ DKSIKFHDFV NPQLAQKATD LVMGSCVVIL SDGEVPVKAD ASTIAISCWR GKASLAVMAT VADCQELLER FAEKTPKTEG GSVNGSNGDS
801: DGPLAMET

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L601]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.