CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25593	Canola	nucleus	97.44	96.09
Bra030242.1-P	Field mustard	nucleus	97.31	95.96
CDY13765	Canola	nucleus	90.28	87.16
CDX76928	Canola	nucleus	89.64	86.86
CDY15291	Canola	nucleus	16.75	84.52
AT2G22400.1	Thale cress	cytosol	85.42	82.67
CDX69365	Canola	cytosol	64.96	70.17
KRH59299	Soybean	cytosol	28.52	70.13
CDY68255	Canola	cytosol, mitochondrion	63.68	69.75
VIT_07s0191g00040.t01	Wine grape	nucleus	62.66	58.54
KRH43150	Soybean	nucleus	61.0	58.17
KRH31314	Soybean	cytosol	59.59	57.11
Solyc05g051520.2.1	Tomato	nucleus	57.67	54.8
Solyc11g010110.1.1	Tomato	nucleus	60.87	54.21
PGSC0003DMT400041672	Potato	nucleus	60.74	54.1
GSMUA_Achr7P19120_001	Banana	nucleus	55.5	52.16
TraesCS5B01G247600.1	Wheat	cytosol, mitochondrion	55.88	50.06
TraesCS5A01G249700.1	Wheat	cytosol	55.88	50.0
TraesCS5D01G256900.1	Wheat	cytosol	55.63	49.83
EER96904	Sorghum	nucleus	55.63	49.77
Zm00001d020810_P002	Maize	nucleus	55.75	49.04
Os09t0471900-01	Rice	nucleus	54.99	48.86
KRH59300	Soybean	mitochondrion	30.18	48.66
KRG97553	Soybean	extracellular, plasma membrane	24.42	46.47
KXG25732	Sorghum	mitochondrion	49.87	46.15
Zm00001d031265_P029	Maize	mitochondrion	48.08	45.58
TraesCS4D01G060100.1	Wheat	plastid	47.19	44.51
TraesCS4A01G254100.3	Wheat	mitochondrion	47.31	44.47
TraesCS4B01G060400.1	Wheat	mitochondrion, plastid	47.19	44.3
KRH45277	Soybean	cytosol	5.12	36.36
CDY28964	Canola	cytosol	4.35	25.37
CDX85924	Canola	cytosol	4.09	24.62
CDX87063	Canola	plastid	9.97	16.12
CDY19785	Canola	plastid	9.97	16.12
CDY06550	Canola	nucleus	13.04	16.11
CDY66223	Canola	mitochondrion	5.24	16.08
CDY68035	Canola	nucleus	13.04	15.77
CDY05536	Canola	plastid	9.72	15.54
CDX89321	Canola	plastid	12.66	15.49
CDX94307	Canola	plastid	12.53	15.38
CDY24989	Canola	plastid	9.59	15.34
CDY28628	Canola	nucleus	12.66	15.11
CDY17367	Canola	mitochondrion, nucleus	12.79	14.95
CDY43364	Canola	plastid	9.72	14.53
CDY24205	Canola	plastid	9.59	14.42
CDY06532	Canola	cytosol	6.01	12.57
CDX91690	Canola	cytosol, plastid	2.43	9.27
CDY17518	Canola	cytosol	2.3	8.78
CDY62126	Canola	cytosol	2.56	8.73
CDY65896	Canola	nucleus	2.3	7.89
HORVU6Hr1G034260.1	Barley	extracellular	0.64	7.25

Protein Annotations

KEGG:00564+2.1.1.17	MapMan:16.6.7.8	Gene3D:3.40.50.150	GO:A0A078DJU3	EnsemblPlants:CDX89460	ProteinID:CDX89460
ProteinID:CDX89460.1	InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016428	GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00149719001	InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189	PRINTS:PR02008	PRINTS:PR02011
ScanProsite:PS01153	PFscan:PS51686	PANTHER:PTHR22808	PANTHER:PTHR22808:SF14	MetaCyc:PWY-6825	InterPro:RCMT
InterPro:RCMT_NCL1	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0004EDF42B	SEG:seg	:

Description

BnaC04g34790D

Coordinates

chrLK031859:-:95373..99505

Molecular Weight (calculated)

87550.3 Da

IEP (calculated)

5.539

GRAVY (calculated)

-0.497

Length

782 amino acids

Sequence
(BLAST)

001: MGRGRQRGRS QRKHFKESRE NVWKRPKSDA PDKPTWEPFL TDNPNFEEYY KEQGIVKAEE WDLFMEILRK PLPAAFRVNS NSQFCDEIIS ILENDFVKSL
101: QAEAIEGGEL EAIKPLPWYP KNLAWHSNFS RKEIRKNKIL ERFHEFLKLE NEVGNMTRQE AVSMVPPLFL DVHPDHFVLD MCAAPGSKTF QLLEIIHGAS
201: EPGTLPNGMV VANDVDFQRS NLLIHQTKRM CTANLIVTNH EGQQFPGCRL KGLSEDMPIN QLSFDRVLCD VPCSGDGTLR KAPDIWRKWN SGMGNGLHSL
301: QVILAMRGLS LLKVGGKMIY STCSMNPVED EAVVAEILRR CGDSVELVDV SDKLPELIRR PGLKTWKVRD KGGWFTSYKD VPQNRRGGVI VSMFPSGKNL
401: KDSTETTQEN ENGGVQDECK ETENSVVDAI PDEPVVEVSD LPLERCMRIV PHDQNTGAFF IAVLHKVSPL PEFQEKPNPR KHSSKKNADS TEKSPAEEAV
501: VSANTEPVEE EDANNEKDDD SLEPEKQTTQ GETTITEEKE ANPPSQAGGK RKVPMQGRWK GFDPVVFLKE ETLIDSIKEF YGIKDESFPL YGHLVTRNTD
601: TSSVKRIYYV SKSVKEVLQL NFAVGQQLKI ASVGLKMFER QSAKEGSSKP CSFRISAEGL PVILPYITKQ VLYTPMADFK HLLEHKSIRF PDFVNPQLSQ
701: KATELVLGCC VVILSDGEEP VKADASTIAI SCWRAVGNNS LAVMITLADC QELLERLAER TPKTGGGSVD GNNGDSVAME TA

Best Arabidopsis Sequence Match ( AT2G22400.1 )
(BLAST)

001: MGRGGRHRGR TQRKDFKESR ENVWKRPKSD ASVDGSDNAV PEQKPTWEPI VTVNPNFEEY YKKQGIVKAE EWDLFMEILR KPLPAAFRVN SNGQFCDEII
101: SILENDFMKS LQAEAIEGGE LEAIKPLPWY PKNLAWHSNF SRKEIRKNQT LERFHEFLKL ENEVGNITRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT
201: FQLLEIIHEA SEPGSLPNGL VVANDVDFKR SNLLIHQTKR MCTSNLIVTN HEGQQFPGCR LNKSRASEKG ISENMPINQL AFDRVLCDVP CSGDGTLRKA
301: PDIWRKWNSG MGNGLHSLQI ILAMRGLSLL KVGGKMIYST CSMNPVEDEA VVAEILRRCG DSVELLDVSD KLPELIRRPG LKAWKVRDKG GWFTSYKDVP
401: QNRRGGVLVS MFPSGKYLKD STETTEKNEN GDVNGCEDGL KETDISVVDA TPEEQAEEVS DLPLERCMRI IPHDQNTGAF FIAVLQKKSP LPEFQEKPNT
501: KRNSTAKSTD STEKSPSKES VVTVDAGVPD ESAVEKVIEA DSNIEKNDSL EPEKKITEGE SITEDKEANS SNAGGKRKVP MQGKWKGFDP VVFVKDETVI
601: NGIKEFYGIK DESFPLHGHL VARNTDTSSV KRIYYVSKSV KEVLQLNFAV GQQLKIASVG LKMFERQSAK EGSSTLCPFR ISSEGLPVIL PYITKQVLYT
701: PMADFKLLLQ DKSIKFHDFV NPQLAQKATD LVMGSCVVIL SDGEVPVKAD ASTIAISCWR GKASLAVMAT VADCQELLER FAEKTPKTEG GSVNGSNGDS
801: DGPLAMET

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L601]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.