Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62126 | Canola | cytosol | 93.86 | 93.45 |
| CDY17518 | Canola | cytosol | 82.89 | 92.2 |
| CDX91690 | Canola | cytosol, plastid | 82.02 | 91.22 |
| VIT_19s0015g00830.t01 | Wine grape | nucleus | 54.82 | 34.72 |
| KRH75188 | Soybean | cytosol | 43.86 | 31.95 |
| CDY06550 | Canola | nucleus | 71.93 | 25.91 |
| CDY68035 | Canola | nucleus | 72.37 | 25.5 |
| CDY06532 | Canola | cytosol | 41.23 | 25.13 |
| CDY28628 | Canola | nucleus | 69.3 | 24.12 |
| CDY17367 | Canola | mitochondrion, nucleus | 68.42 | 23.32 |
| CDX94307 | Canola | plastid | 60.53 | 21.66 |
| CDX89321 | Canola | plastid | 60.09 | 21.44 |
| KRH46413 | Soybean | nucleus | 55.7 | 20.68 |
| KRG98455 | Soybean | nucleus | 56.14 | 20.65 |
| PGSC0003DMT400057532 | Potato | nucleus | 56.14 | 20.09 |
| GSMUA_Achr7P20140_001 | Banana | nucleus | 50.0 | 19.03 |
| Solyc07g052110.2.1 | Tomato | nucleus | 56.14 | 18.13 |
| KXG30856 | Sorghum | nucleus, plastid | 48.68 | 16.04 |
| Zm00001d051652_P003 | Maize | plasma membrane | 48.68 | 15.46 |
| Os09t0551300-02 | Rice | nucleus | 47.37 | 15.45 |
| Os02t0724600-01 | Rice | nucleus | 46.93 | 15.44 |
| Zm00001d017887_P004 | Maize | plastid | 49.12 | 15.26 |
| HORVU6Hr1G072030.1 | Barley | plastid | 46.49 | 14.02 |
| TraesCS6B01G315600.1 | Wheat | plastid | 46.49 | 13.87 |
| TraesCS6D01G267300.1 | Wheat | plastid | 46.49 | 13.82 |
| TraesCS6A01G286600.1 | Wheat | nucleus | 46.49 | 13.71 |
| CDY15291 | Canola | nucleus | 5.26 | 7.74 |
| CDY24205 | Canola | plastid | 15.35 | 6.73 |
| CDY43364 | Canola | plastid | 15.35 | 6.69 |
| CDX87063 | Canola | plastid | 12.28 | 5.79 |
| CDY24989 | Canola | plastid | 12.28 | 5.73 |
| CDY05536 | Canola | plastid | 12.28 | 5.73 |
| CDY19785 | Canola | plastid | 11.84 | 5.58 |
| CDY66223 | Canola | mitochondrion | 5.26 | 4.71 |
| CDX85924 | Canola | cytosol | 2.63 | 4.62 |
| CDY28964 | Canola | cytosol | 2.63 | 4.48 |
| VIT_19s0015g00840.t01 | Wine grape | nucleus | 4.82 | 4.28 |
| CDX69365 | Canola | cytosol | 8.33 | 2.62 |
| CDY68255 | Canola | cytosol, mitochondrion | 7.89 | 2.52 |
| CDX89460 | Canola | nucleus | 7.89 | 2.3 |
| CDY25593 | Canola | nucleus | 7.89 | 2.27 |
| CDX76928 | Canola | nucleus | 7.89 | 2.23 |
| CDY13765 | Canola | nucleus | 7.89 | 2.22 |
Protein Annotations
| EnsemblPlants:CDY65896 | EnsemblPlantsGene:GSBRNA2T00050965001 | Gene3D:3.30.70.1170 | GO:A0A078JJA1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016740 | GO:GO:0032259 | InterPro:RCMT_NOP2 |
| PANTHER:PTHR22807 | PANTHER:PTHR22807:SF30 | PRINTS:PR02012 | ProteinID:CDY65896 | ProteinID:CDY65896.1 | SEG:seg |
| UniParc:UPI0004EE4108 | UniProt:A0A078JJA1 | MapMan:35.2 | : | : | : |
Description
BnaCnng49010DBnaCnng49010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJA1]
Coordinates
chrLK034991:+:19777..20862
Molecular Weight (calculated)
25881.8 Da
IEP (calculated)
4.839
GRAVY (calculated)
-0.474
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQLPAMYS SSQTKFIDRA KAKEEEDADA EHLDFNKEVG PGEESEQDTF RLPTEELEEE SRGPTDLPLP QSRIKEIVRA LSNFNGLRPK GASRKDCAEQ
101: LKSDLASYYG YSFLIGTLFE LFLLVKLMEI KLMEIIEAFD KRRPSSIWTN TLKTRRRDLA EVLLNRGINP DSLSKWSTLG LVVYDSQVPI GATPEYLAGY
201: YMVSDLLTRA CSDFGKPVMS RKEEHLWG
101: LKSDLASYYG YSFLIGTLFE LFLLVKLMEI KLMEIIEAFD KRRPSSIWTN TLKTRRRDLA EVLLNRGINP DSLSKWSTLG LVVYDSQVPI GATPEYLAGY
201: YMVSDLLTRA CSDFGKPVMS RKEEHLWG
001: MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPEVGEPYFF CSTIFFSWHL
501: HVFSLVLFVQ QIMQNEAVID YALKNRDVKL VPCGLDFGRP G
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPEVGEPYFF CSTIFFSWHL
501: HVFSLVLFVQ QIMQNEAVID YALKNRDVKL VPCGLDFGRP G
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.