CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89321	Canola	plastid	96.39	96.09
AT4G26600.5	Thale cress	plastid	78.96	71.65
CDY06550	Canola	nucleus	68.29	68.72
CDY68035	Canola	nucleus	69.54	68.47
CDY28628	Canola	nucleus	68.45	66.56
CDX91690	Canola	cytosol, plastid	21.19	65.85
CDY17367	Canola	mitochondrion, nucleus	68.45	65.17
CDY62126	Canola	cytosol	22.45	62.45
CDY65896	Canola	nucleus	21.66	60.53
CDY17518	Canola	cytosol	19.0	59.02
CDY06532	Canola	cytosol	34.38	58.56
GSMUA_Achr7P20140_001	Banana	nucleus	52.28	55.59
KXG30856	Sorghum	nucleus, plastid	54.0	49.71
Os02t0724600-01	Rice	nucleus	53.85	49.49
Os09t0551300-02	Rice	nucleus	54.16	49.36
Zm00001d051652_P003	Maize	plasma membrane	52.9	46.94
Zm00001d017887_P004	Maize	plastid	53.69	46.59
TraesCS6D01G267300.1	Wheat	plastid	54.63	45.37
HORVU6Hr1G072030.1	Barley	plastid	53.85	45.37
TraesCS6B01G315600.1	Wheat	plastid	54.16	45.16
TraesCS6A01G286600.1	Wheat	nucleus	54.63	45.02
CDY28964	Canola	cytosol	6.44	30.6
CDX85924	Canola	cytosol	6.12	30.0
CDY66223	Canola	mitochondrion	9.42	23.53
CDY24989	Canola	plastid	16.48	21.47
CDY05536	Canola	plastid	16.48	21.47
CDY19785	Canola	plastid	16.01	21.07
CDY24205	Canola	plastid	16.95	20.77
CDX87063	Canola	plastid	15.7	20.66
CDY43364	Canola	plastid	16.95	20.65
CDY68255	Canola	cytosol, mitochondrion	14.91	13.31
CDX69365	Canola	cytosol	15.07	13.26
CDY15291	Canola	nucleus	3.14	12.9
CDX76928	Canola	nucleus	16.33	12.89
CDY13765	Canola	nucleus	16.33	12.84
CDX89460	Canola	nucleus	15.38	12.53
CDY25593	Canola	nucleus	15.54	12.48

Protein Annotations

KEGG:00564+2.1.1.17	MapMan:17.1.2.2.3.6	Gene3D:3.30.70.3130	Gene3D:3.40.50.150	GO:A0A078DZE8	EnsemblPlants:CDX94307
ProteinID:CDX94307	ProteinID:CDX94307.1	ncoils:Coil	InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0006364	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00157402001
InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2	InterPro:Methyltr_RsmF_N	InterPro:Nop2p	PFAM:PF01189	PFAM:PF17125
PRINTS:PR02008	PRINTS:PR02012	ScanProsite:PS01153	PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF30
MetaCyc:PWY-6825	InterPro:RCMT	InterPro:RCMT_NOP2	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TIGRFAMs:TIGR00446
UniParc:UPI0004EE42CF	SEG:seg	:	:	:	:

Description

BnaC01g18770D

Coordinates

chrLK031881:-:124993..128892

Molecular Weight (calculated)

71821.8 Da

IEP (calculated)

5.276

GRAVY (calculated)

-0.879

Length

637 amino acids

Sequence
(BLAST)

001: MPALTRNKKK GAKSQTPPLI KRTKSNPTPP PKKAAKSHKP PLKKQRKGIL DEKPEVYNDE EEEEEEEVSE HSDEGDELGS DLFSDGDGEE EEEEEDTEPL
101: GDDFLDGSDD EEETLGSDSD SDLEKESKAI DEERERQERD AKDELQMNIK EQPDEFRLPT KKELEEEASG PPDLPALQTR IKEIVRVLSN FKDLRPEGVK
201: RKEFVEQLKA DLASYYGYNE FLIGTLVEMF PPVELMELIE AFEKQRPTSI RTNTLKTRRR DLADVLLNRG VNLDPLSKWS KVGLVVYDSQ VPIGATPEYL
301: AGCYMLQSAS SFLPVMALAP RENERVVDMA AAPGGKTTYV ASLMKNTGII YANEMKVPRL KSLTANLHRM GVTNTIVCNY DGRELPKVFG PNSVDRVLLD
401: APCSGTGVIS KDESVKTSKS ANDIRKFADL QKQLILAAID LVDAESKTGG YIVYSTCSIM IPENEAVIDY ALKKRDVKLV PCGLDFGQAG FSRFREHRFH
501: PTLEKTRRFY PHVHNMDGFF VAKLKKMSNE TKASEGDEPV KTKEQAQLSS DEDDDDESIK ELKKPSGANV DMNKQRISIS KANNKGKKNK NFKTENANVE
601: GPRKQKKKRS QWKAEIAQAR EDKRKVMREN TKEPGRR

Best Arabidopsis Sequence Match ( AT4G26600.1 )
(BLAST)

001: MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPENEAVIDY ALKNRDVKLV
501: PCGLDFGRPG FSSFREHRFH PSLEKTRRFY PHVHNMDGFF VAKLKKMSNA MQPSGNDEPA VTMEQAQVSS SDDDDEKAEA IEELEKPPVA SGQPKRESNT
601: KEDTNKRKNP RSKEIHKGKR NKNTKTESGN VEEPRKQKKK RSQWKNEIAQ AREEKRKTMR ENAKETPKHR G

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.