Factsheet for Zm00001d051652_P003

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 2
nucleus 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 23508561
plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30856	Sorghum	nucleus, plastid	86.07	89.31
Zm00001d017887_P004	Maize	plastid	88.72	86.78
Os02t0724600-01	Rice	nucleus	73.68	76.33
Os09t0551300-02	Rice	nucleus	73.54	75.54
TraesCS6B01G315600.1	Wheat	plastid	72.98	68.59
TraesCS6D01G267300.1	Wheat	plastid	73.12	68.45
HORVU6Hr1G072030.1	Barley	plastid	71.45	67.86
TraesCS6A01G286600.1	Wheat	nucleus	72.98	67.79
GSMUA_Achr7P20140_001	Banana	nucleus	53.06	63.61
VIT_19s0015g00840.t01	Wine grape	nucleus	20.75	57.98
KRG98455	Soybean	nucleus	49.16	56.94
KRH46413	Soybean	nucleus	48.47	56.68
VIT_19s0015g00830.t01	Wine grape	nucleus	27.86	55.56
PGSC0003DMT400057532	Potato	nucleus	48.61	54.79
CDX94307	Canola	plastid	46.94	52.9
CDX89321	Canola	plastid	46.52	52.27
Bra026418.1-P	Field mustard	plastid	46.1	51.64
Bra035594.1-P	Field mustard	nucleus	45.68	51.25
CDY06550	Canola	nucleus	45.13	51.18
KRH75188	Soybean	cytosol	22.28	51.12
CDY68035	Canola	nucleus	45.82	50.85
CDY28628	Canola	nucleus	46.38	50.84
CDX91690	Canola	cytosol, plastid	14.48	50.73
Bra002867.1-P	Field mustard	mitochondrion, nucleus	46.24	50.38
CDY17367	Canola	mitochondrion, nucleus	45.96	49.33
Solyc07g052110.2.1	Tomato	nucleus	48.47	49.29
CDY62126	Canola	cytosol	15.6	48.91
AT5G55920.1	Thale cress	nucleus	46.38	48.83
AT4G26600.5	Thale cress	plastid	47.63	48.72
CDY65896	Canola	nucleus	15.46	48.68
CDY17518	Canola	cytosol	13.37	46.83
CDY06532	Canola	cytosol	22.56	43.32
Zm00001d016374_P002	Maize	cytosol, plastid	12.81	18.47
Zm00001d031265_P029	Maize	mitochondrion	14.48	12.61
Zm00001d020810_P002	Maize	nucleus	13.79	11.14

Protein Annotations

EntrezGene:100191678	MapMan:17.1.2.2.3.6	Gene3D:3.30.70.3130	Gene3D:3.40.50.150	ProteinID:AQK54800.1	UniProt:B4F9Q9
EMBL:BT033847	ncoils:Coil	InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0006364	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008757	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259	InterPro:IPR001678
InterPro:MeTrfase_RsmB/NOP2	InterPro:Methyltr_RsmF_N	InterPro:Nop2p	PFAM:PF01189	PFAM:PF17125	PRINTS:PR02008
PRINTS:PR02012	ScanProsite:PS01153	PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF30	InterPro:RCMT
InterPro:RCMT_NOP2	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TIGRFAMs:TIGR00446	UniParc:UPI00017B627C	EnsemblPlantsGene:Zm00001d051652
EnsemblPlants:Zm00001d051652_P003	EnsemblPlants:Zm00001d051652_T003	SEG:seg	:	:	:

Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Coordinates

chr4:-:165776302..165784785

Molecular Weight (calculated)

79785.5 Da

IEP (calculated)

5.418

GRAVY (calculated)

-0.862

Length

718 amino acids

Sequence
(BLAST)

001: MAKKGAKRKQ QLPPAPTAKN GSKAVLPLKA AKRAPKKQKV LESSDDSDTE QQQQLQEEDS DLDVSSDSDA EELSGSDAEA DELSGSDADA DGGSTRGDDM
101: DDDDDDEDGE SDDDSLADDF LAGSDEGSEG GDSGLESDGS DDLEAKSRAI DEQKLKAEED AEEELQTNIR SESDEFRLPT TEELEEEAHR PPNLPNLKRR
201: ISEIVRVLSN FSKLRQKDVP RKDYINQLKT DVMSYYGYND FLVEALIEMF PAVELVELLE AFEKRPPECL RTNTLKSRRR DLAAALIPRG FNLDPIGKWS
301: KVGLVVYDST ISAGATTEYM AGHYMKQGAS SFLPVMALAP QEKERIVDMA AAPGGKTTYI GALMKNTGII YANEFNEKRL HGLMGNIHRM GVTNTIICNY
401: DGKELPKVLG MNSVDRVLLD APCTGTGTIW KDLQIKTSKD IEDIRNCAFV QKQLLLAAID LVDANSKTGG YIVYSTCSIM IPENEAVIDY ALKKRNVKLV
501: PCGLDFGRPG FIRYREHRFH TSLEKTRRFY PHVNNMDGFF VAKLKKLSNT IPVTSEQPKA SEGAAEKADG EDEKVISNEQ ETAVPGKDEK TVQMINHKKS
601: KVTNKRTSVT KEAGGHKREP NRSGKHLNKN KDTDTKEVDG PESTETNGDG KEEQREQTKQ TSHKRKIDSV KTKKSGPVSF SGVQEKNQVS GKKTKRKWQF
701: KLRRDWEAEK KGTKRSKV

Best Arabidopsis Sequence Match ( AT4G26600.1 )
(BLAST)

001: MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPENEAVIDY ALKNRDVKLV
501: PCGLDFGRPG FSSFREHRFH PSLEKTRRFY PHVHNMDGFF VAKLKKMSNA MQPSGNDEPA VTMEQAQVSS SDDDDEKAEA IEELEKPPVA SGQPKRESNT
601: KEDTNKRKNP RSKEIHKGKR NKNTKTESGN VEEPRKQKKK RSQWKNEIAQ AREEKRKTMR ENAKETPKHR G

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.