Factsheet for Bra035594.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68035	Canola	nucleus	99.06	97.99
CDY06550	Canola	nucleus	95.47	96.52
Bra002867.1-P	Field mustard	mitochondrion, nucleus	83.91	81.49
AT5G55920.1	Thale cress	nucleus	77.81	73.02
Bra026418.1-P	Field mustard	plastid	68.75	68.64
KRG98455	Soybean	nucleus	59.38	61.29
KRH46413	Soybean	nucleus	58.44	60.91
VIT_19s0015g00830.t01	Wine grape	nucleus	34.06	60.56
VIT_19s0015g00840.t01	Wine grape	nucleus	23.91	59.53
PGSC0003DMT400057532	Potato	nucleus	56.88	57.14
GSMUA_Achr7P20140_001	Banana	nucleus	50.31	53.76
Solyc07g052110.2.1	Tomato	nucleus	57.66	52.27
KRH75188	Soybean	cytosol	25.16	51.44
Os09t0551300-02	Rice	nucleus	53.12	48.64
Os02t0724600-01	Rice	nucleus	52.5	48.48
KXG30856	Sorghum	nucleus, plastid	51.72	47.83
Zm00001d051652_P003	Maize	plasma membrane	51.25	45.68
Zm00001d017887_P004	Maize	plastid	51.41	44.82
HORVU6Hr1G072030.1	Barley	plastid	51.25	43.39
TraesCS6B01G315600.1	Wheat	plastid	51.72	43.32
TraesCS6D01G267300.1	Wheat	plastid	51.72	43.16
TraesCS6A01G286600.1	Wheat	nucleus	51.72	42.82
Bra022117.1-P	Field mustard	cytosol	6.88	23.4
Bra039376.1-P	Field mustard	plastid	17.34	21.22
Bra036564.1-P	Field mustard	mitochondrion	15.16	20.04
Bra020544.1-P	Field mustard	mitochondrion, plastid	15.31	20.04
Bra011816.1-P	Field mustard	cytosol, mitochondrion	15.0	13.45
Bra030242.1-P	Field mustard	nucleus	15.62	12.61
Bra038528.1-P	Field mustard	nucleus	15.94	12.59

Protein Annotations

MapMan:17.1.2.2.3.6	Gene3D:3.30.70.3130	Gene3D:3.40.50.150	EnsemblPlantsGene:Bra035594	EnsemblPlants:Bra035594.1	EnsemblPlants:Bra035594.1-P
ncoils:Coil	InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0005488	GO:GO:0006139	GO:GO:0006364	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008757	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259	InterPro:IPR001678	UniProt:M4F3E4
InterPro:MeTrfase_RsmB/NOP2	InterPro:Methyltr_RsmF_N	InterPro:Nop2p	PFAM:PF01189	PFAM:PF17125	PRINTS:PR02008
PRINTS:PR02012	ScanProsite:PS01153	PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF30	InterPro:RCMT
InterPro:RCMT_NOP2	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TIGRFAMs:TIGR00446	UniParc:UPI00025462B1	SEG:seg

Description

AT5G55920 (E=4e-205) OLI2 | nucleolar protein, putative

Coordinates

chrA02:+:7376288..7379731

Molecular Weight (calculated)

71690.8 Da

IEP (calculated)

5.423

GRAVY (calculated)

-0.780

Length

640 amino acids

Sequence
(BLAST)

001: MVLTRSSKKA PKPQTPPVKN LSKAQTPPLS KAEKPQTLTS KKGAKSQKKP PLKKQKKDVV VEEEEVSDVE SEEIDESDDG EKGSNGFFSD DDGEELLGDD
101: FLEGSGDEEE VLSSDSDSDS DEDDIQKESE AIDRAKAKEE EDADAELLDF NKEAGPEEHE TFRLPTQEEL EEEARGPPDL PLLQSRIKEI VRALSNFNVL
201: RPKGASRKEC VEQLKTDLAS YYGYNSFLIG ALFELFPPVE LMEIIEAFEK QRPTSIRTNT LKTRRRDLAD VLLNRGVNLD PLSKWSKVGL VVYDSQVPIG
301: ATPEYLAGYY MLQGASSFLP VMALAPKENE RIVDVAAAPG GKTTYVAALM KNTGLIFANE MKVPRLKSLT ANLHRMGVTN TIVCNYDGRE LPKVLGERSV
401: DRVLLDAPCS GTGVISKDES VKTSKSLEDI KRFAHLQKQL LLAAIDLVDA TSKTGGYIVY STCSLMVAEN EAVIDYALKK RNVQLVKTGL DFGQDGYRRF
501: REHRFHPSLK QTKRFYPHVH NMDGFFVAKL KKMSNMKQAS EDDDEAVETV EQADVSSDDD EEAEAMEEME KLSVPSKQPK ENKERLAKSK EKKKGKKDGK
601: SKSINVERKP KKKRSDWKKE IAQAREEKRR AMRENSKGKQ

Best Arabidopsis Sequence Match ( AT5G55920.1 )
(BLAST)

001: MPALTRNKKK AATKSITPPT KQLTKSKTPP MKPQTSMLKK GAKSQNKPPL KKQKKEVVEE EPLEDYEVTD DSDEDDEVSD GSDEDDISPA VESEEIDESD
101: DGENGSNQLF SDDEEENDEE TLGDDFLEGS GDEDEEGSLD ADSDADSDDD DIVAKSDAID RDLAMQKKDA AAELEDFIKQ DDVHDEEPEH DAFRLPTEEE
201: LEEEARGPPD LPLLKTRIEE IVRALKNFKA FRPKDTTRKA CVEQLKADLG SYYGYNSFLI GTLVEMFPPG ELMELIEAFE KQRPTSIRTN TLKTRRRDLA
301: DVLLNRGVNL DPLSKWSKVG LVIYDSQVPI GATPEYLAGY YMLQGASSFL PVMALAPREN ERIVDVAAAP GGKTTYIAAL MKNTGLIYAN EMKVPRLKSL
401: TANLHRMGVT NTIVCNYDGR ELPKVLGQNT VDRVLLDAPC SGTGIISKDE SVKITKTMDE IKKFAHLQKQ LLLAAIDMVD ANSKTGGYIV YSTCSIMVTE
501: NEAVIDYALK KRDVKLVTCG LDFGRKGFTR FREHRFQPSL DKTRRFYPHV HNMDGFFVAK LKKMSNVKQS SEEGDDDAVE TVEQAEVSSD DDDEAEAIEE
601: TEKPSVPVRQ PKERKEKKNK EKLAKSKEDK RGKKDKKSKS ENVEEPSKPR KQKKKRREWK NEIAQAREEK RIAMREKAKE EK

Arabidopsis Description

OLI2Nucleolar protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FG73]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.