CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0015g00830.t01	Wine grape	nucleus	61.02	53.06
CDY62126	Canola	cytosol	32.59	44.54
CDX91690	Canola	cytosol, plastid	29.07	44.39
CDY17518	Canola	cytosol	28.75	43.9
CDY65896	Canola	nucleus	31.95	43.86
KRH46413	Soybean	nucleus	67.41	34.36
KRG98455	Soybean	nucleus	65.81	33.23
CDY06532	Canola	cytosol	38.98	32.62
PGSC0003DMT400057532	Potato	nucleus	55.91	27.47
Bra026418.1-P	Field mustard	plastid	54.63	26.68
Solyc07g052110.2.1	Tomato	nucleus	57.19	25.35
GSMUA_Achr7P20140_001	Banana	nucleus	48.24	25.21
Bra035594.1-P	Field mustard	nucleus	51.44	25.16
Bra002867.1-P	Field mustard	mitochondrion, nucleus	52.08	24.73
AT4G26600.5	Thale cress	plastid	54.31	24.22
Os02t0724600-01	Rice	nucleus	52.08	23.52
AT5G55920.1	Thale cress	nucleus	51.12	23.46
KXG30856	Sorghum	nucleus, plastid	51.12	23.12
Os09t0551300-02	Rice	nucleus	51.12	22.89
Zm00001d051652_P003	Maize	plasma membrane	51.12	22.28
Zm00001d017887_P004	Maize	plastid	51.44	21.93
HORVU6Hr1G072030.1	Barley	plastid	51.44	21.3
TraesCS6D01G267300.1	Wheat	plastid	51.44	20.99
TraesCS6A01G286600.1	Wheat	nucleus	51.44	20.83
TraesCS6B01G315600.1	Wheat	plastid	50.48	20.68
KRH59299	Soybean	cytosol	11.5	11.32
KRH73916	Soybean	plastid	15.34	8.99
KRH52232	Soybean	nucleus	14.06	8.96
KRH61558	Soybean	nucleus	14.06	8.91
KRH14216	Soybean	cytosol	6.39	6.9
KRH31314	Soybean	cytosol	11.18	4.29
KRH43150	Soybean	nucleus	11.18	4.27
KRG97553	Soybean	extracellular, plasma membrane	0.64	0.49
KRH59300	Soybean	mitochondrion	0.0	0.0
VIT_19s0015g00840.t01	Wine grape	nucleus	0.0	0.0
KRH45277	Soybean	cytosol	0.0	0.0

Protein Annotations

MapMan:17.1.2.2.3.6	Gene3D:3.30.70.3130	Gene3D:3.40.50.150	EMBL:ACUP02000147	EnsemblPlantsGene:GLYMA_01G068500	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008173	GO:GO:0008757	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259
GO:GO:0070475	InterPro:IPR001678	UniProt:K7K2A4	EnsemblPlants:KRH75188	ProteinID:KRH75188	ProteinID:KRH75188.1
InterPro:MeTrfase_RsmB/NOP2	InterPro:Methyltr_RsmF_N	PFAM:PF01189	PFAM:PF17125	PRINTS:PR02012	PFscan:PS51686
PANTHER:PTHR22807	PANTHER:PTHR22807:SF30	MetaCyc:PWY-6825	InterPro:RCMT_NOP2	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
UniParc:UPI000294F2D7	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:11402860..11405432

Molecular Weight (calculated)

34882.4 Da

IEP (calculated)

4.447

GRAVY (calculated)

-0.378

Length

313 amino acids

Sequence
(BLAST)

001: MLRHRSGEQV KLAVVHGFLG GNGEHGLGIV DEGEGVAGEG VHVVVRVEEE HEAAILGTNV VHVGGVAKDL KDPLPITVVV IDPRLTDDER VDHPRDDDSD
101: DGNTEKKSRA IDEEKEKEEE DTDAEMQLNI NQESNEFRLP TKEELEEEAL RPPDLSNLQR RTKENIRCCN CFKCLKKDLC TYYGYNEFLI GALVEVVVEL
201: MELIEAFEKP RPICLRTNTL KTRRWDLADV LINRGVNLDP LSKWSTVGLV VYDSQVPIGA TPEYMAGFYT LQSASSFLPF MALAPQEKER VVDMAAAPGG
301: KTTYIAALMM NTD

Best Arabidopsis Sequence Match ( AT4G26600.8 )
(BLAST)

001: MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPENEAVIDY ALKNRDVKLV
501: PCGLDFGRPG

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.