Factsheet for Bra026418.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89321	Canola	plastid	97.5	97.81
AT4G26600.5	Thale cress	plastid	77.69	70.94
Bra035594.1-P	Field mustard	nucleus	68.64	68.75
Bra002867.1-P	Field mustard	mitochondrion, nucleus	68.17	66.31
VIT_19s0015g00830.t01	Wine grape	nucleus	36.19	64.44
KRG98455	Soybean	nucleus	60.37	62.42
KRH46413	Soybean	nucleus	59.75	62.38
VIT_19s0015g00840.t01	Wine grape	nucleus	24.96	62.26
PGSC0003DMT400057532	Potato	nucleus	60.37	60.75
GSMUA_Achr7P20140_001	Banana	nucleus	52.11	55.76
Solyc07g052110.2.1	Tomato	nucleus	60.69	55.1
KRH75188	Soybean	cytosol	26.68	54.63
Os02t0724600-01	Rice	nucleus	53.2	49.21
KXG30856	Sorghum	nucleus, plastid	53.04	49.13
Os09t0551300-02	Rice	nucleus	53.35	48.93
Zm00001d051652_P003	Maize	plasma membrane	51.64	46.1
Zm00001d017887_P004	Maize	plastid	52.57	45.91
TraesCS6D01G267300.1	Wheat	plastid	53.67	44.85
HORVU6Hr1G072030.1	Barley	plastid	52.89	44.84
TraesCS6B01G315600.1	Wheat	plastid	53.35	44.76
TraesCS6A01G286600.1	Wheat	nucleus	53.67	44.5
Bra020544.1-P	Field mustard	mitochondrion, plastid	16.07	21.06
Bra039376.1-P	Field mustard	plastid	17.16	21.03
Bra022117.1-P	Field mustard	cytosol	6.08	20.74
Bra036564.1-P	Field mustard	mitochondrion	15.13	20.04
Bra011816.1-P	Field mustard	cytosol, mitochondrion	14.82	13.31
Bra038528.1-P	Field mustard	nucleus	16.38	12.96
Bra030242.1-P	Field mustard	nucleus	15.44	12.48

Protein Annotations

MapMan:17.1.2.2.3.6	Gene3D:3.30.70.3130	Gene3D:3.40.50.150	EnsemblPlantsGene:Bra026418	EnsemblPlants:Bra026418.1	EnsemblPlants:Bra026418.1-P
ncoils:Coil	InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0005488	GO:GO:0006139	GO:GO:0006364	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008757	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259	InterPro:IPR001678	UniProt:M4ECA9
InterPro:MeTrfase_RsmB/NOP2	InterPro:Methyltr_RsmF_N	InterPro:Nop2p	PFAM:PF01189	PFAM:PF17125	PRINTS:PR02008
PRINTS:PR02012	ScanProsite:PS01153	PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF30	InterPro:RCMT
InterPro:RCMT_NOP2	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TIGRFAMs:TIGR00446	UniParc:UPI0002545561	SEG:seg

Description

AT4G26600 (E=2e-213) | nucleolar protein, putative

Coordinates

chrA01:+:9412480..9416058

Molecular Weight (calculated)

72241.1 Da

IEP (calculated)

5.115

GRAVY (calculated)

-0.916

Length

641 amino acids

Sequence
(BLAST)

001: MPALTRNKQK GAKSQTPPLI KRTKSNPTPP PKKAMKSHKP PLKKQRKGVS DEKPEVSNDE EEEEEEEEEE VSEESDEGDE LGSDLFSDGD EEEEEEEEPS
101: DDDFLGGSDE EKGTLGSDSD SDESDIEKES KAIDDERERQ EQDAKDELQM NIKEQPDEFR LPTKKELEEE ASGPPDLPTL QTRIKEIVRV LSNFKDLRPE
201: GVKRKEFVEQ LKADLGSYYG YNEFLIGTLV EMFPPVELME LIQAFEKQRP TSIRTNTLKT RRRDLADVLL NRGVNLDPLS KWSKVGLVVY DSQVPIGATP
301: EYLAGFYMLQ SASSFLPVMA LAPRENERVV DMAAAPGGKT TYVASLMKNT GIIYANEMKV PRLKSLTANL HRMGVTNTIV CNYDGRELPK VFGPNSVDRV
401: LLDAPCSGTG VISKDESVKT SKSANDIRKF ADLQKQLILA AIDLVDAESK TGGYIVYSTC SIMIPENEAV IDYALKKRDV KLVPCGLDFG QAGFTRFREH
501: RFHPTLEKTR RFYPHVHNMD GFFVAKLKKM SNETKASEGD EPVETKEQAQ LSSDEDDDDE SIKELKKPSG ANVVKNKQRI PISKANNKGK KNKNFKTENA
601: NAEGPRKQKK KRSQWKAEIA QAREDKRKVM REKNTKEPGR R

Best Arabidopsis Sequence Match ( AT4G26600.1 )
(BLAST)

001: MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPENEAVIDY ALKNRDVKLV
501: PCGLDFGRPG FSSFREHRFH PSLEKTRRFY PHVHNMDGFF VAKLKKMSNA MQPSGNDEPA VTMEQAQVSS SDDDDEKAEA IEELEKPPVA SGQPKRESNT
601: KEDTNKRKNP RSKEIHKGKR NKNTKTESGN VEEPRKQKKK RSQWKNEIAQ AREEKRKTMR ENAKETPKHR G

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.