Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94307 | Canola | plastid | 71.65 | 78.96 |
| Bra026418.1-P | Field mustard | plastid | 70.94 | 77.69 |
| CDX89321 | Canola | plastid | 70.66 | 77.62 |
| AT5G55920.1 | Thale cress | nucleus | 64.96 | 66.86 |
| KRG98455 | Soybean | nucleus | 55.13 | 62.42 |
| KRH46413 | Soybean | nucleus | 54.42 | 62.22 |
| VIT_19s0015g00830.t01 | Wine grape | nucleus | 31.62 | 61.67 |
| VIT_19s0015g00840.t01 | Wine grape | nucleus | 22.36 | 61.09 |
| PGSC0003DMT400057532 | Potato | nucleus | 53.99 | 59.5 |
| GSMUA_Achr7P20140_001 | Banana | nucleus | 47.29 | 55.43 |
| Solyc07g052110.2.1 | Tomato | nucleus | 54.84 | 54.53 |
| KRH75188 | Soybean | cytosol | 24.22 | 54.31 |
| KXG30856 | Sorghum | nucleus, plastid | 49.0 | 49.71 |
| Os02t0724600-01 | Rice | nucleus | 49.0 | 49.64 |
| Os09t0551300-02 | Rice | nucleus | 49.0 | 49.21 |
| Zm00001d051652_P003 | Maize | plasma membrane | 48.72 | 47.63 |
| Zm00001d017887_P004 | Maize | plastid | 48.72 | 46.59 |
| HORVU6Hr1G072030.1 | Barley | plastid | 48.15 | 44.71 |
| TraesCS6D01G267300.1 | Wheat | plastid | 48.58 | 44.46 |
| TraesCS6A01G286600.1 | Wheat | nucleus | 48.86 | 44.37 |
| TraesCS6B01G315600.1 | Wheat | plastid | 47.72 | 43.85 |
| AT4G17590.1 | Thale cress | cytosol | 7.83 | 27.36 |
| AT3G13180.1 | Thale cress | plastid | 16.1 | 21.61 |
| AT5G26180.3 | Thale cress | plastid | 13.82 | 17.11 |
| AT4G40000.1 | Thale cress | nucleus | 14.1 | 12.64 |
| AT2G22400.1 | Thale cress | cytosol | 13.96 | 12.13 |
Protein Annotations
| MapMan:17.1.2.2.3.6 | Gene3D:3.30.70.3130 | Gene3D:3.40.50.150 | EntrezGene:828767 | UniProt:A0A1P8B455 | ProteinID:ANM66385.1 |
| ProteinID:ANM66388.1 | ProteinID:ANM66389.1 | ArrayExpress:AT4G26600 | EnsemblPlantsGene:AT4G26600 | RefSeq:AT4G26600 | TAIR:AT4G26600 |
| RefSeq:AT4G26600-TAIR-G | EnsemblPlants:AT4G26600.5 | Unigene:At.28358 | ncoils:Coil | InterPro:Fmu/NOL1/Nop2p_CS | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006364 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008757 | GO:GO:0009987 | GO:GO:0016740 |
| GO:GO:0032259 | InterPro:IPR001678 | InterPro:MeTrfase_RsmB/NOP2 | InterPro:Methyltr_RsmF_N | RefSeq:NP_001328282.1 | RefSeq:NP_001328285.1 |
| RefSeq:NP_001328286.1 | InterPro:Nop2p | PFAM:PF01189 | PFAM:PF17125 | PRINTS:PR02008 | PRINTS:PR02012 |
| ScanProsite:PS01153 | PFscan:PS51686 | PANTHER:PTHR22807 | PANTHER:PTHR22807:SF30 | InterPro:RCMT | InterPro:RCMT_NOP2 |
| InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | TIGRFAMs:TIGR00446 | UniParc:UPI000848B98D | SEG:seg | : |
Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]
Coordinates
chr4:+:13419561..13423791
Molecular Weight (calculated)
79280.4 Da
IEP (calculated)
5.822
GRAVY (calculated)
-0.884
Length
702 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPEVGEPYFF CSTIFFSWHL
501: HVFSLVLFVQ QIMQNEAVID YALKNRDVKL VPCGLDFGRP GFSSFREHRF HPSLEKTRRF YPHVHNMDGF FVAKLKKMSN AMQPSGNDEP AVTMEQAQVS
601: SSDDDDEKAE AIEELEKPPV ASGQPKRESN TKEDTNKRKN PRSKEIHKGK RNKNTKTESG NVEEPRKQKK KRSQWKNEIA QAREEKRKTM RENAKETPKH
701: RG
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPEVGEPYFF CSTIFFSWHL
501: HVFSLVLFVQ QIMQNEAVID YALKNRDVKL VPCGLDFGRP GFSSFREHRF HPSLEKTRRF YPHVHNMDGF FVAKLKKMSN AMQPSGNDEP AVTMEQAQVS
601: SSDDDDEKAE AIEELEKPPV ASGQPKRESN TKEDTNKRKN PRSKEIHKGK RNKNTKTESG NVEEPRKQKK KRSQWKNEIA QAREEKRKTM RENAKETPKH
701: RG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.