Factsheet for Os02t0724600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
plastid 3

Predictors

GFP

MS/MS

Papers

nucleus: 23777608

msms PMID: 23777608 doi

H Mujahid, F Tan, J Zhang, BR Nallamilli, K Pendarvis, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0551300-02	Rice	nucleus	91.63	90.84
KXG30856	Sorghum	nucleus, plastid	73.59	73.7
Zm00001d051652_P003	Maize	plasma membrane	76.33	73.68
Zm00001d017887_P004	Maize	plastid	76.62	72.34
TraesCS6B01G315600.1	Wheat	plastid	75.9	68.85
TraesCS6D01G267300.1	Wheat	plastid	76.05	68.71
HORVU6Hr1G072030.1	Barley	plastid	74.6	68.39
TraesCS6A01G286600.1	Wheat	nucleus	75.9	68.05
GSMUA_Achr7P20140_001	Banana	nucleus	56.42	65.28
VIT_19s0015g00840.t01	Wine grape	nucleus	21.79	58.75
KRG98455	Soybean	nucleus	52.24	58.39
KRH46413	Soybean	nucleus	51.66	58.31
VIT_19s0015g00830.t01	Wine grape	nucleus	29.58	56.94
PGSC0003DMT400057532	Potato	nucleus	50.36	54.79
CDX94307	Canola	plastid	49.49	53.85
CDX89321	Canola	plastid	49.35	53.52
Bra026418.1-P	Field mustard	plastid	49.21	53.2
Bra035594.1-P	Field mustard	nucleus	48.48	52.5
CDY06550	Canola	nucleus	47.91	52.45
KRH75188	Soybean	cytosol	23.52	52.08
CDY68035	Canola	nucleus	48.34	51.78
CDY28628	Canola	nucleus	48.63	51.45
Solyc07g052110.2.1	Tomato	nucleus	51.95	50.99
Bra002867.1-P	Field mustard	mitochondrion, nucleus	48.2	50.68
CDY17367	Canola	mitochondrion, nucleus	48.34	50.07
AT5G55920.1	Thale cress	nucleus	48.63	49.41
CDX91690	Canola	cytosol, plastid	14.57	49.27
AT4G26600.5	Thale cress	plastid	49.64	49.0
CDY62126	Canola	cytosol	15.58	47.16
CDY65896	Canola	nucleus	15.44	46.93
CDY17518	Canola	cytosol	13.28	44.88
CDY06532	Canola	cytosol	23.81	44.12
Os09t0477900-01	Rice	mitochondrion, plastid	16.16	19.65
Os02t0217800-00	Rice	plastid	12.84	17.62
Os09t0471900-01	Rice	nucleus	14.57	11.48

Protein Annotations

MapMan:17.1.2.2.3.6	Gene3D:3.30.70.3130	Gene3D:3.40.50.150	EntrezGene:4330579	UniProt:A0A0P0VP26	ProteinID:BAS80682.1
ncoils:Coil	InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0000470	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005730	GO:GO:0006139	GO:GO:0006364	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008757	GO:GO:0009383	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259	GO:GO:0070475
InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2	InterPro:Methyltr_RsmF_N	InterPro:Nop2p	EnsemblPlantsGene:Os02g0724600	EnsemblPlants:Os02t0724600-01
PFAM:PF01189	PFAM:PF17125	PRINTS:PR02008	PRINTS:PR02012	ScanProsite:PS01153	PFscan:PS51686
PANTHER:PTHR22807	PANTHER:PTHR22807:SF30	InterPro:RCMT	InterPro:RCMT_NOP2	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
TIGRFAMs:TIGR00446	UniParc:UPI0001C7DF86	RefSeq:XP_015622657.1	SEG:seg	:	:

Description

Similar to predicted protein. (Os02t0724600-01)

Coordinates

chr2:+:30110288..30115478

Molecular Weight (calculated)

77363.0 Da

IEP (calculated)

5.718

GRAVY (calculated)

-0.862

Length

693 amino acids

Sequence
(BLAST)

001: MAKKGAPRRQ PPPPPPRQLA AGKKGKASPK AAKRAAPKKQ RLLESSSDDS ELEQQQGQLQ EVESGSDLDV PSDSGAEELS DSDDASFEGG DSGDEEEEED
101: DEDGDDDPLA DDFLAGSDDE SDGGDDSGVD SDESDDLEAK SRAIDEEKEK AEEEAEEELK LNIRSESDEF RLPTKEELEE EALRPPNLPN LKRRISEIVR
201: VLSNFSKLRQ KDVPRKDYVN QLKTDIMSYY GYNDFLVEAF IEMFPAVELV ELLESFEKRP PECLRTNTLK TRRRDLAAAL IPRGFNLDPI GKWSKVGLVV
301: YDSTISAGAT VEYMAGHYMK QGASSFLPVM ALAPQEKERI VDMAAAPGGK TTYIGALMKN TGIIYANEFN EKRLHGLLGN IHRMGVTNTI VCNYDGKELP
401: KVLGMNSVDR VLLDAPCTGT GTIWKDPQIK TSKGIEDIRD CAFVQKQLLL AAIDLVDANS KTGGYIVYST CSLMIPENEA VVDYALKKRN VKLVPCGLDF
501: GRPGFIRFRE HRFHTSLDKT RRFYPHVNNM DGFFVAKLKK LSNTIPVASE SSNVPEEAIE KADPSSDDPQ KQPIQSKKHK DVKTTNEETS ILDGVTKDKR
601: QTHETLKNHK KGKKRNGPES TKIKGDQKET HNEEEPTSEK KQPVSAKIKK SVPKRISGNK GKKLDTGKGE KRKRNWMVRR DWEAYKKSRS KQV

Best Arabidopsis Sequence Match ( AT4G26600.1 )
(BLAST)

001: MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPENEAVIDY ALKNRDVKLV
501: PCGLDFGRPG FSSFREHRFH PSLEKTRRFY PHVHNMDGFF VAKLKKMSNA MQPSGNDEPA VTMEQAQVSS SDDDDEKAEA IEELEKPPVA SGQPKRESNT
601: KEDTNKRKNP RSKEIHKGKR NKNTKTESGN VEEPRKQKKK RSQWKNEIAQ AREEKRKTMR ENAKETPKHR G

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.