CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62126	Canola	cytosol	96.1	86.03
CDY65896	Canola	nucleus	91.22	82.02
CDY17518	Canola	cytosol	80.98	80.98
VIT_19s0015g00830.t01	Wine grape	nucleus	57.07	32.5
KRH75188	Soybean	cytosol	44.39	29.07
CDY06532	Canola	cytosol	47.8	26.2
CDY06550	Canola	nucleus	72.68	23.54
CDY68035	Canola	nucleus	72.68	23.03
CDY28628	Canola	nucleus	71.22	22.29
CDY17367	Canola	mitochondrion, nucleus	70.24	21.52
CDX94307	Canola	plastid	65.85	21.19
CDX89321	Canola	plastid	65.37	20.97
KRG98455	Soybean	nucleus	58.54	19.35
KRH46413	Soybean	nucleus	57.56	19.22
PGSC0003DMT400057532	Potato	nucleus	59.02	19.0
GSMUA_Achr7P20140_001	Banana	nucleus	53.17	18.2
Solyc07g052110.2.1	Tomato	nucleus	59.51	17.28
KXG30856	Sorghum	nucleus, plastid	50.73	15.03
Os09t0551300-02	Rice	nucleus	49.76	14.59
Os02t0724600-01	Rice	nucleus	49.27	14.57
Zm00001d051652_P003	Maize	plasma membrane	50.73	14.48
Zm00001d017887_P004	Maize	plastid	51.22	14.31
HORVU6Hr1G072030.1	Barley	plastid	48.78	13.23
TraesCS6B01G315600.1	Wheat	plastid	48.78	13.09
TraesCS6D01G267300.1	Wheat	plastid	48.78	13.04
TraesCS6A01G286600.1	Wheat	nucleus	48.78	12.94
CDY15291	Canola	nucleus	5.85	7.74
CDY24205	Canola	plastid	16.59	6.54
CDY43364	Canola	plastid	16.59	6.5
CDY24989	Canola	plastid	14.15	5.93
CDY05536	Canola	plastid	14.15	5.93
CDY19785	Canola	plastid	12.68	5.37
CDX87063	Canola	plastid	12.2	5.17
CDY66223	Canola	mitochondrion	5.85	4.71
CDX85924	Canola	cytosol	2.93	4.62
CDY28964	Canola	cytosol	2.93	4.48
VIT_19s0015g00840.t01	Wine grape	nucleus	5.37	4.28
CDX69365	Canola	cytosol	9.76	2.76
CDY68255	Canola	cytosol, mitochondrion	9.27	2.66
CDX89460	Canola	nucleus	9.27	2.43
CDY25593	Canola	nucleus	9.27	2.4
CDX76928	Canola	nucleus	9.27	2.35
CDY13765	Canola	nucleus	9.27	2.35

Protein Annotations

EnsemblPlants:CDX91690	EnsemblPlantsGene:GSBRNA2T00153168001	Gene3D:3.30.70.1170	GO:A0A078DQT6	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:RCMT_NOP2	PANTHER:PTHR22807
PANTHER:PTHR22807:SF30	PRINTS:PR02012	ProteinID:CDX91690	ProteinID:CDX91690.1	SEG:seg	UniParc:UPI0004EEB892
MapMan:35.2	:	:	:	:	:

Description

BnaC08g06090D

Coordinates

chrLK031869:-:223221..224871

Molecular Weight (calculated)

23452.2 Da

IEP (calculated)

7.248

GRAVY (calculated)

-0.341

Length

205 amino acids

Sequence
(BLAST)

001: MASQLPAMYS SSQTKFIDRA KDTFRLPTEE ELEEEYRGPP YLPLPQSRIK EIVRALSNFN GLRPKGASRK DCAEQLKSDL ASYYGYSLLI GTLFELFLPI
101: ELVEIKLMEI IDAFDKQRPS SIWTNTLKTR RRDLADVLLN RGVNPDLYPL SKWSKLGLVV YDSQVPISAT PEYLAGYYMV SDLLTRACSD FGKPVMSRKE
201: EHLWG

Best Arabidopsis Sequence Match ( AT4G26600.1 )
(BLAST)

001: MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPENEAVIDY ALKNRDVKLV
501: PCGLDFGRPG FSSFREHRFH PSLEKTRRFY PHVHNMDGFF VAKLKKMSNA MQPSGNDEPA VTMEQAQVSS SDDDDEKAEA IEELEKPPVA SGQPKRESNT
601: KEDTNKRKNP RSKEIHKGKR NKNTKTESGN VEEPRKQKKK RSQWKNEIAQ AREEKRKTMR ENAKETPKHR G

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.