CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68255	Canola	cytosol, mitochondrion	93.78	95.1
AT4G40000.1	Thale cress	nucleus	81.91	75.73
CDY15291	Canola	nucleus	14.23	66.45
KRH59299	Soybean	cytosol	29.01	66.04
CDX89460	Canola	nucleus	70.17	64.96
CDY25593	Canola	nucleus	70.03	63.93
CDY13765	Canola	nucleus	70.3	62.84
CDX76928	Canola	nucleus	69.89	62.7
VIT_07s0191g00040.t01	Wine grape	nucleus	62.98	54.48
KRH43150	Soybean	nucleus	60.5	53.41
KRH31314	Soybean	cytosol	59.39	52.7
Solyc05g051520.2.1	Tomato	nucleus	57.87	50.91
GSMUA_Achr7P19120_001	Banana	nucleus	55.8	48.56
Solyc11g010110.1.1	Tomato	nucleus	58.7	48.41
PGSC0003DMT400041672	Potato	nucleus	58.7	48.41
TraesCS5B01G247600.1	Wheat	cytosol, mitochondrion	55.25	45.82
TraesCS5D01G256900.1	Wheat	cytosol	55.25	45.82
TraesCS5A01G249700.1	Wheat	cytosol	55.25	45.77
EER96904	Sorghum	nucleus	54.42	45.08
Zm00001d020810_P002	Maize	nucleus	54.7	44.54
Os09t0471900-01	Rice	nucleus	54.01	44.43
KRH59300	Soybean	mitochondrion	29.14	43.51
TraesCS4D01G060100.1	Wheat	plastid	49.45	43.18
KXG25732	Sorghum	mitochondrion	50.14	42.96
TraesCS4A01G254100.3	Wheat	mitochondrion	49.31	42.91
Zm00001d031265_P029	Maize	mitochondrion	48.76	42.79
TraesCS4B01G060400.1	Wheat	mitochondrion, plastid	49.03	42.62
KRG97553	Soybean	extracellular, plasma membrane	22.93	40.39
KRH45277	Soybean	cytosol	4.97	32.73
CDY28964	Canola	cytosol	4.56	24.63
CDX85924	Canola	cytosol	4.28	23.85
CDX87063	Canola	plastid	11.6	17.36
CDY19785	Canola	plastid	11.33	16.94
CDY05536	Canola	plastid	11.33	16.77
CDY24989	Canola	plastid	11.33	16.77
CDY66223	Canola	mitochondrion	5.66	16.08
CDY06550	Canola	nucleus	13.67	15.64
CDY68035	Canola	nucleus	13.67	15.3
CDY28628	Canola	nucleus	13.67	15.11
CDX94307	Canola	plastid	13.26	15.07
CDY17367	Canola	mitochondrion, nucleus	13.81	14.95
CDX89321	Canola	plastid	13.12	14.87
CDY43364	Canola	plastid	10.64	14.72
CDY24205	Canola	plastid	10.5	14.62
CDY06532	Canola	cytosol	6.91	13.37
CDX91690	Canola	cytosol, plastid	2.76	9.76
CDY17518	Canola	cytosol	2.62	9.27
CDY62126	Canola	cytosol	2.9	9.17
CDY65896	Canola	nucleus	2.62	8.33
HORVU6Hr1G034260.1	Barley	extracellular	0.69	7.25

Protein Annotations

KEGG:00564+2.1.1.17	MapMan:16.6.7.8	GO:A0A078BX28	EnsemblPlants:CDX69365	ProteinID:CDX69365	ProteinID:CDX69365.1
InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016428	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00131216001
InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189	PRINTS:PR02008	PRINTS:PR02011	ScanProsite:PS01153
PFscan:PS51686	PANTHER:PTHR22808	PANTHER:PTHR22808:SF14	MetaCyc:PWY-6825	InterPro:RCMT	InterPro:RCMT_NCL1
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0004EDF4F9	SEG:seg	:	:

Description

BnaC01g00880D

Coordinates

chrLK031789:+:4383085..4386327

Molecular Weight (calculated)

81485.2 Da

IEP (calculated)

7.094

GRAVY (calculated)

-0.453

Length

724 amino acids

Sequence
(BLAST)

001: MGRGRRHRGR SHRNQSEESR ENAPKPLKSD APFDSAIQNR TWSNLDFEEY YKEQRIVKAE EWDSFIEILR KPLPAAFRVN SNGQFCDEIL SMLENDFVKS
101: LQAEAVESGE VEAIKPLPWY PNNLAWHSNF SRKEIRKNQT LERFHEFLKL ETEVGNMTRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT FQLLEIIHES
201: AEPGSLPNGM VVANDVDYKR SNLLIHQTKR TCTTNLIVTN NEGQHFPNCN SIASEKCHHP IDQLLFDRVL CDVPCSGDGT LRKAPDIWRR WNSGSGNGLH
301: SLQVVIAMRG LSLLKVGGRM VYSTCSMNPI EDEAVVAQIL RRCGCSVELV DVSDKLPELI RRPGLKKWKV HDRGGWYRSY KDVPKVQRDG VLRSMFPSGK
401: SDKDSTTGEI ASDESAEEVC NLPLERCVRI VPHDQNTGGF FIAVLHKVSS LPDFQEKRRY TRGRNSSEKT SYEENKEEIV VEEEAASDNG LKLEKETTSK
501: EGTVELGKEV PPPVKGKWKG LDPVVFLRDE TVIDGIKRFY GINDESFPLN GHLVTRNSDT STKGNVKRIY YVSRSVKDVL ELNLAVGEKI KVASVGLKMF
601: EKQSARECEA GSCSFRITSE GLHVILPYMT KQLLYATMVD FKNLLQYKSI KFTDFVHPQF GQKAAEVAEG YCVVILVDGA QKDGSEAVKV NSSTIAIGCW
701: KGKASLTVMV TTVDCDQLIQ KLAC

Best Arabidopsis Sequence Match ( AT4G40000.1 )
(BLAST)

001: MGRGRRHRGS TSKRNQIENS NDDNVRKPLK SEASFDSNNL QKPICSNLHF EEYYKEQRIV KAQEWDSFME FLRKPLPAAF RVYSNGQFCD EIRLKLENDF
101: MISLQAEAIE SGELEAIKPL PWYPKNLAWH SNFSRKEIRK NQTLERFHEF LKLETEAGNM TRQESVSMVP PLFLDVHPDH FVLDMCAAPG SKTFQLLEII
201: HESSEPGSLP NGMVVANDVD YKRSNLLIHQ TKRTCTTNLM VTNNEGQHFP SCNTKRTLSV ASETNPHPID QLLFDRVLCD VPCSGDGTLR KAPDIWRRWN
301: SGSGNGLHSL QVVLAMRGLS LLKVGGRMVY STCSMNPIED EAVVAEILRR CGCSVELVDV SDKLPELIRR PGLTKWKVHD RGGWYRSYKD VPKSQRDGVL
401: RSMFPSGKSD KDSSGGKNSY EEMASISSDE SAEEVCDLPL ELCMRILPHD QNTGGFFIAV LHKVSPLPDF QEKVTQKRNL STRNNINSSE KSSSYEAVSD
501: TVVTKPEEGT EEIVLEATVS ENGFEPPEME STWNEGIVEL AQKLDDIEGK REVPSMQGKW KGLYPVVFLR DQTGINGIKT FYGIKDESFP LYGHLVTRNS
601: DISSHGNVKR IYYVSKAVKN VLELNFAVGK PLKISSVGLK MFEKQSAKEC EANCCSFRIT SEGLPVILPY MTKQILYATM ADFKNLLQHK SIKFLDFIHP
701: QIGEKAAELA LGSCVMVLVD DSQLGSEQFK VNSSTIAIGC WKGKASLTVM VTTVDCHQLI QRLSDRSKEK EKAENCFKTA ETA

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JJ52]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.