CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15291	Canola	nucleus	18.96	98.71
Bra038528.1-P	Field mustard	nucleus	96.28	95.93
CDY13765	Canola	nucleus	96.03	95.68
CDX89460	Canola	nucleus	86.86	89.64
CDY25593	Canola	nucleus	87.24	88.78
AT2G22400.1	Thale cress	cytosol	85.13	85.02
KRH59299	Soybean	cytosol	27.88	70.75
CDX69365	Canola	cytosol	62.7	69.89
CDY68255	Canola	cytosol, mitochondrion	61.59	69.61
VIT_07s0191g00040.t01	Wine grape	nucleus	60.97	58.78
KRH43150	Soybean	nucleus	59.48	58.54
KRH31314	Soybean	cytosol	58.49	57.84
PGSC0003DMT400041672	Potato	nucleus	59.36	54.56
Solyc11g010110.1.1	Tomato	nucleus	59.23	54.44
Solyc05g051520.2.1	Tomato	nucleus	55.27	54.19
GSMUA_Achr7P19120_001	Banana	nucleus	55.39	53.73
TraesCS5B01G247600.1	Wheat	cytosol, mitochondrion	55.14	50.97
TraesCS5D01G256900.1	Wheat	cytosol	54.89	50.74
TraesCS5A01G249700.1	Wheat	cytosol	54.89	50.69
EER96904	Sorghum	nucleus	54.15	50.0
Os09t0471900-01	Rice	nucleus	53.9	49.43
Zm00001d020810_P002	Maize	nucleus	54.4	49.38
KRH59300	Soybean	mitochondrion	29.49	49.07
KRG97553	Soybean	extracellular, plasma membrane	24.29	47.69
KXG25732	Sorghum	mitochondrion	49.32	47.1
Zm00001d031265_P029	Maize	mitochondrion	47.34	46.3
TraesCS4A01G254100.3	Wheat	mitochondrion	47.71	46.27
TraesCS4B01G060400.1	Wheat	mitochondrion, plastid	47.46	45.98
TraesCS4D01G060100.1	Wheat	plastid	46.84	45.6
KRH45277	Soybean	cytosol	5.33	39.09
CDY28964	Canola	cytosol	4.09	24.63
CDX85924	Canola	cytosol	3.84	23.85
CDY19785	Canola	plastid	10.04	16.74
CDX87063	Canola	plastid	9.91	16.53
CDY06550	Canola	nucleus	12.89	16.43
CDX94307	Canola	plastid	12.89	16.33
CDX89321	Canola	plastid	12.89	16.28
CDY05536	Canola	plastid	9.79	16.16
CDY66223	Canola	mitochondrion	5.08	16.08
CDY68035	Canola	nucleus	12.89	16.07
CDY24989	Canola	plastid	9.67	15.95
CDY28628	Canola	nucleus	12.76	15.73
CDY17367	Canola	mitochondrion, nucleus	12.76	15.4
CDY43364	Canola	plastid	9.42	14.53
CDY24205	Canola	plastid	9.29	14.42
CDY06532	Canola	cytosol	5.7	12.3
CDX91690	Canola	cytosol, plastid	2.35	9.27
CDY17518	Canola	cytosol	2.23	8.78
CDY62126	Canola	cytosol	2.48	8.73
CDY65896	Canola	nucleus	2.23	7.89
HORVU6Hr1G034260.1	Barley	extracellular	0.62	7.25

Protein Annotations

KEGG:00564+2.1.1.17	MapMan:16.6.7.8	GO:A0A078CPB7	EnsemblPlants:CDX76928	ProteinID:CDX76928	ProteinID:CDX76928.1
InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016428	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00127461001
InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189	PRINTS:PR02008	PRINTS:PR02011	ScanProsite:PS01153
PFscan:PS51686	PANTHER:PTHR22808	PANTHER:PTHR22808:SF14	MetaCyc:PWY-6825	InterPro:RCMT	InterPro:RCMT_NCL1
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0004EC8D2B	SEG:seg	:	:

Description

BnaC08g35140D

Coordinates

chrLK031808:+:2121634..2125594

Molecular Weight (calculated)

90397.7 Da

IEP (calculated)

5.735

GRAVY (calculated)

-0.485

Length

807 amino acids

Sequence
(BLAST)

001: MGRGRHRGRS QRKHFKESRE NVWKRPRTDP TVDASDNAVA DKPSWEPILT DNPNFEEYYK EQGLVRAEEW DVFMEILRKP LPAAFRVNSN SQFCDDIISI
101: LENDFVKSLQ AEAIEGGELE AIKPLPWYPK NLAWHSNFSR KQIRKHKTLE RFHEFLKLEN EVGNITRQEA VSMVPPLFLD VHPDHFVLDM CAAPGSKTFQ
201: LLEIIHGASE PGTLPNGMVV ANDVDFQRSN LLIHQTKRMC TSNLIVTNHE GQQFPGCRLN KSRASEKGLS EDMPINQLSF DRVLCDVPCS GDGTLRKAPD
301: IWRKWNSGMG NGLHSLQVIL AMRGLSLLKV GGKMIYSTCS MNPVEDEAVV AEILRRCGDS VELVDVSDKL PELIRRPGLK TWKVRDKGAW FTSYKDVPQN
401: RRGGVLVSMF PFGKNLKETS ETTEENENEN ENVGCKETDK SVVDAIPDEP VVEVSDLPLE RCMRIIPHDQ NTGAFFIAVL RKVSPLPEFQ EKPNPRKHSS
501: NKTADSTEKS PAEEAVVTAD AEPVESPVEK VIEADADIEK DVSLVEPEKE KNTEGETIKE EKEANSSSHA GDKRKVPMQG KWKGFDPVVF LKDETLIDSI
601: KEFYGIRDES FPLYGHLVTR NTDTSSVKRI YYVSKSVKEV LQLNFAVAQQ LKIASVGLKM FERQTAKEGG SKPCSFRISS EGLPVILPYI TKQVLYSPMA
701: DFKHLLEYKS IKFPDFVNKQ LGQKAIDLVL GCCVVILSDG EEPVKVDAST IAISCWRGKN SLGVMVTSAD CQELLERLAE RTPKTEVGSV NGSYGDSGGP
801: AEPMETA

Best Arabidopsis Sequence Match ( AT2G22400.1 )
(BLAST)

001: MGRGGRHRGR TQRKDFKESR ENVWKRPKSD ASVDGSDNAV PEQKPTWEPI VTVNPNFEEY YKKQGIVKAE EWDLFMEILR KPLPAAFRVN SNGQFCDEII
101: SILENDFMKS LQAEAIEGGE LEAIKPLPWY PKNLAWHSNF SRKEIRKNQT LERFHEFLKL ENEVGNITRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT
201: FQLLEIIHEA SEPGSLPNGL VVANDVDFKR SNLLIHQTKR MCTSNLIVTN HEGQQFPGCR LNKSRASEKG ISENMPINQL AFDRVLCDVP CSGDGTLRKA
301: PDIWRKWNSG MGNGLHSLQI ILAMRGLSLL KVGGKMIYST CSMNPVEDEA VVAEILRRCG DSVELLDVSD KLPELIRRPG LKAWKVRDKG GWFTSYKDVP
401: QNRRGGVLVS MFPSGKYLKD STETTEKNEN GDVNGCEDGL KETDISVVDA TPEEQAEEVS DLPLERCMRI IPHDQNTGAF FIAVLQKKSP LPEFQEKPNT
501: KRNSTAKSTD STEKSPSKES VVTVDAGVPD ESAVEKVIEA DSNIEKNDSL EPEKKITEGE SITEDKEANS SNAGGKRKVP MQGKWKGFDP VVFVKDETVI
601: NGIKEFYGIK DESFPLHGHL VARNTDTSSV KRIYYVSKSV KEVLQLNFAV GQQLKIASVG LKMFERQSAK EGSSTLCPFR ISSEGLPVIL PYITKQVLYT
701: PMADFKLLLQ DKSIKFHDFV NPQLAQKATD LVMGSCVVIL SDGEVPVKAD ASTIAISCWR GKASLAVMAT VADCQELLER FAEKTPKTEG GSVNGSNGDS
801: DGPLAMET

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L601]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.