CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020544.1-P	Field mustard	mitochondrion, plastid	97.75	97.75
CDY05536	Canola	plastid	97.14	97.14
CDY19785	Canola	plastid	86.3	87.19
CDX87063	Canola	plastid	85.89	86.78
AT5G26180.3	Thale cress	plastid	83.44	71.96
Solyc08g062560.2.1	Tomato	nucleus	59.51	63.26
PGSC0003DMT400021199	Potato	cytosol, plastid	61.55	62.58
VIT_04s0008g01480.t01	Wine grape	plastid	64.62	62.2
KRH52232	Soybean	nucleus	59.51	59.27
KRH61558	Soybean	nucleus	59.3	58.7
Os02t0217800-00	Rice	plastid	58.08	56.24
Zm00001d016374_P002	Maize	cytosol, plastid	56.65	55.62
KXG29808	Sorghum	plastid	56.24	55.33
GSMUA_Achr5P24950_001	Banana	mitochondrion	57.87	55.17
TraesCS6A01G183400.2	Wheat	plastid	57.06	55.14
TraesCS6B01G213900.2	Wheat	plastid	56.85	54.94
TraesCS6D01G171500.1	Wheat	plastid	56.65	54.74
HORVU6Hr1G038870.11	Barley	cytosol	54.81	51.05
Solyc08g062440.1.1	Tomato	endoplasmic reticulum	21.68	49.3
CDY28964	Canola	cytosol	6.95	25.37
CDX85924	Canola	cytosol	6.54	24.62
CDY66223	Canola	mitochondrion	9.61	18.43
CDY06532	Canola	cytosol	13.09	17.11
CDX94307	Canola	plastid	21.47	16.48
CDX89321	Canola	plastid	21.06	16.12
CDY06550	Canola	nucleus	20.04	15.48
CDY28628	Canola	nucleus	20.65	15.42
CDY68035	Canola	nucleus	20.04	15.15
CDY17367	Canola	mitochondrion, nucleus	20.65	15.1
CDY24205	Canola	plastid	15.95	15.0
CDY43364	Canola	plastid	15.75	14.72
CDX91690	Canola	cytosol, plastid	5.93	14.15
CDY62126	Canola	cytosol	6.54	13.97
CDY65896	Canola	nucleus	5.73	12.28
CDY17518	Canola	cytosol	5.11	12.2
CDY68255	Canola	cytosol, mitochondrion	16.77	11.48
CDX69365	Canola	cytosol	16.77	11.33
CDY15291	Canola	nucleus	3.07	9.68
CDX76928	Canola	nucleus	15.95	9.67
CDX89460	Canola	nucleus	15.34	9.59
CDY25593	Canola	nucleus	15.34	9.46
CDY13765	Canola	nucleus	15.54	9.38

Protein Annotations

KEGG:00564+2.1.1.17	Gene3D:3.30.70.1170	Gene3D:3.40.50.150	MapMan:35.2	GO:A0A078GI69	UniProt:A0A078GI69
EnsemblPlants:CDY24989	ProteinID:CDY24989	ProteinID:CDY24989.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740
GO:GO:0032259	EnsemblPlantsGene:GSBRNA2T00028795001	InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189	PRINTS:PR02008
PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF4	MetaCyc:PWY-6825	InterPro:RCMT	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	UniParc:UPI0004EEF46F	SEG:seg	:	:	:

Description

BnaC02g40190DBnaC02g40190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GI69]

Coordinates

chrLK032167:-:59693..63322

Molecular Weight (calculated)

54871.5 Da

IEP (calculated)

10.227

GRAVY (calculated)

-0.307

Length

489 amino acids

Sequence
(BLAST)

001: MARHKSNAPP KVTRQPRKQQ QSSGAERSAL YARREAAKVL HTVLRGDAER RAVASIKSLV FSPSVRNKRG TFALVCETLK YLDVIKDVLG IANVLNSKWK
101: RQEPLVYIIC YDILFGKETP SIGDAEKFLV RRKDALLSGL ATLLVRKRVK SVEELLDHSQ LNGHIKQRYV RVNTLKMDVD SAVKELEKLY KVQKDETVPD
201: LLVMPPGSDL HAHPLVMNGR IFLQGKGSSM VAAALQPEAG WEVIDACSAP GNKTVHLASL MKGQGKIIAC ELNEERVKRL EQTIKLSGAT NIEVFHGDFL
301: SLNPEDPSFA KVRAILLDPS CSGSGTITDR LDHLLPSHSA DNTNYDSIRL HKLAVFQKKA LAHALSFPQV ERVVYSTCSI HQIENEDVVS SVLPLASSLG
401: FKLATPFPQW QRRGLTVFAG SEHLLRMDPV EDKEGFFIAL FTKTNNLDNP KASELPEGEC RRRRKRFYPF LWPKVFFRAW NGRLHGSRR

Best Arabidopsis Sequence Match ( AT5G26180.5 )
(BLAST)

001: MVARRNKPKA PLVKHRFSGG DSHKPKPPPA TKQPFSGVES HKPKTSPATK QKFSGVESHK PKTPPGKQRF SGAESRKPKT PPATKQKFSS LERSALYARR
101: EAANILRTVL RGDAERRAVA SIKSLVLSPS VRNKRGTFAL VCETLKYLTV IKDVLDIANV LNSKWKRQEP LVFIVCYDIL FGKDTPSIGD AEKFLMRHKE
201: ALLSGLATLL VRKKVDSVDQ LLGSKLTGHL KPRYVRVNTL KMDVDSAVQE LEKHYTVQKD ETVPDLLVLP PGSDLHAHRL VANGRIFLQG KASSMVAAAL
301: QPQAGWEVLD ACSAPGNKTI HLAALMEGQG KIIACELNEE RVKRLEHTIK LSGASNIEVC HGDFLGLNPK DPSFAKIRAI LLDPSCSGSG TITDRLDHLL
401: PSHSEDNNMN YDSMRLHKLA VFQKKALAHA LSFPKVERVV YSTCSIYQIE NEDVVSSVLP LASSLGFKLA TPFPQWQRRG LPVFAGSEHL LRMDPVEDKE
501: GFFIALFVRA NKLDNPKSSE LPDRVCRRRP KERTMQLHPY LCPKMFRAWS GTLHRLKTRF LLSRNGC

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.