Factsheet for PGSC0003DMT400021199

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g062560.2.1	Tomato	nucleus	91.06	95.22
Solyc08g062440.1.1	Tomato	endoplasmic reticulum	29.73	66.51
VIT_04s0008g01480.t01	Wine grape	plastid	67.36	63.78
CDY05536	Canola	plastid	62.79	61.76
CDY24989	Canola	plastid	62.58	61.55
Bra020544.1-P	Field mustard	mitochondrion, plastid	62.37	61.35
CDX87063	Canola	plastid	61.54	61.16
CDY19785	Canola	plastid	61.12	60.74
Bra036564.1-P	Field mustard	mitochondrion	60.91	60.54
KRH61558	Soybean	nucleus	60.29	58.7
KRH52232	Soybean	nucleus	59.67	58.45
Zm00001d016374_P002	Maize	cytosol, plastid	57.38	55.42
KXG29808	Sorghum	plastid	56.96	55.13
Os02t0217800-00	Rice	plastid	57.59	54.85
TraesCS6D01G171500.1	Wheat	plastid	57.38	54.55
GSMUA_Achr5P24950_001	Banana	mitochondrion	57.59	54.0
TraesCS6A01G183400.2	Wheat	plastid	56.76	53.95
TraesCS6B01G213900.2	Wheat	plastid	56.76	53.95
AT5G26180.3	Thale cress	plastid	61.33	52.03
HORVU6Hr1G038870.11	Barley	cytosol	54.47	49.9
PGSC0003DMT400057532	Potato	nucleus	19.54	14.76
PGSC0003DMT400076617	Potato	cytosol, plastid	16.22	14.16
PGSC0003DMT400041672	Potato	nucleus	14.97	8.2

Protein Annotations

EntrezGene:102602613	Gene3D:3.30.70.1170	Gene3D:3.40.50.150	MapMan:35.2	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0016740	GO:GO:0032259	InterPro:IPR001678	UniProt:M1AES1	InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189
EnsemblPlantsGene:PGSC0003DMG400008208	PGSC:PGSC0003DMG400008208	EnsemblPlants:PGSC0003DMT400021199	PRINTS:PR02008	PFscan:PS51686	PANTHER:PTHR22807
PANTHER:PTHR22807:SF4	InterPro:RCMT	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000294E2D1	RefSeq:XP_006351606.1
SEG:seg	:	:	:	:	:

Description

Williams-beuren syndrome critical region protein [Source:PGSC_GENE;Acc:PGSC0003DMG400008208]

Coordinates

chr8:-:34558096..34565862

Molecular Weight (calculated)

53835.7 Da

IEP (calculated)

10.309

GRAVY (calculated)

-0.217

Length

481 amino acids

Sequence
(BLAST)

001: MARKKAQGDT KPSAKKPNQN RLSSAERSAL FARRESAKVL RTILQGDARR QAVGSIKSLV YSPSVRNKRA TYALVCQTLK YLPVIKDVFH TANVLSSKWK
101: RQEELMYIIL YDILFGQEAL LAGDAEKFLL QKKNVLQAAL AKLLVRKKVK HVSDLMTSYK ISDLPKPRYA RVNTLKMDVE SALVEFKKQY EVCQDAMVPD
201: LLIFPPRTDL HDHPLVKSGS VFLQGKASSM VAVALGPKPR WEVIDACAAP GNKTVHLAAL MKGNGKIIAC ELNKERVKRL KDTVELAGAT NVEVKHEDFL
301: NLSPEDPAYS KVQAILLDPS CSGSGTVVDR LDHLLPSYTA ESDVNRLEKL AAFQRKALEH ALSFPAVERI VYSTCSINQV ENEDVIKSVL PLASSYGFEL
401: TTIFPQWPRR GHPIFDGSQH VLRTDLIEDQ EGFFIALFVR KGVSPPGKHI RDVGNTLRAV QRRKKRKINS FFLLRTLGLL L

Best Arabidopsis Sequence Match ( AT5G26180.5 )
(BLAST)

001: MVARRNKPKA PLVKHRFSGG DSHKPKPPPA TKQPFSGVES HKPKTSPATK QKFSGVESHK PKTPPGKQRF SGAESRKPKT PPATKQKFSS LERSALYARR
101: EAANILRTVL RGDAERRAVA SIKSLVLSPS VRNKRGTFAL VCETLKYLTV IKDVLDIANV LNSKWKRQEP LVFIVCYDIL FGKDTPSIGD AEKFLMRHKE
201: ALLSGLATLL VRKKVDSVDQ LLGSKLTGHL KPRYVRVNTL KMDVDSAVQE LEKHYTVQKD ETVPDLLVLP PGSDLHAHRL VANGRIFLQG KASSMVAAAL
301: QPQAGWEVLD ACSAPGNKTI HLAALMEGQG KIIACELNEE RVKRLEHTIK LSGASNIEVC HGDFLGLNPK DPSFAKIRAI LLDPSCSGSG TITDRLDHLL
401: PSHSEDNNMN YDSMRLHKLA VFQKKALAHA LSFPKVERVV YSTCSIYQIE NEDVVSSVLP LASSLGFKLA TPFPQWQRRG LPVFAGSEHL LRMDPVEDKE
501: GFFIALFVRA NKLDNPKSSE LPDRVCRRRP KERTMQLHPY LCPKMFRAWS GTLHRLKTRF LLSRNGC

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.