Factsheet for HORVU6Hr1G038870.11

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G213900.2	Wheat	plastid	85.33	88.54
TraesCS6A01G183400.2	Wheat	plastid	85.14	88.34
TraesCS6D01G171500.1	Wheat	plastid	84.95	88.14
Os02t0217800-00	Rice	plastid	71.81	74.65
KXG29808	Sorghum	plastid	68.57	72.43
Zm00001d016374_P002	Maize	cytosol, plastid	68.57	72.29
Solyc08g062560.2.1	Tomato	nucleus	49.71	56.74
CDY05536	Canola	plastid	51.62	55.42
Bra020544.1-P	Field mustard	mitochondrion, plastid	51.43	55.21
GSMUA_Achr5P24950_001	Banana	mitochondrion	53.71	54.97
CDY24989	Canola	plastid	51.05	54.81
CDY19785	Canola	plastid	50.48	54.75
VIT_04s0008g01480.t01	Wine grape	plastid	52.95	54.72
CDX87063	Canola	plastid	50.29	54.55
Bra036564.1-P	Field mustard	mitochondrion	50.29	54.55
PGSC0003DMT400021199	Potato	cytosol, plastid	49.9	54.47
KRH52232	Soybean	nucleus	47.24	50.51
KRH61558	Soybean	nucleus	46.86	49.8
AT5G26180.3	Thale cress	plastid	51.24	47.44
Solyc08g062440.1.1	Tomato	endoplasmic reticulum	16.19	39.53
HORVU5Hr1G071070.1	Barley	plastid	14.86	13.54
HORVU6Hr1G072030.1	Barley	plastid	15.62	10.85
HORVU4Hr1G010180.10	Barley	cytosol	14.1	10.24
HORVU6Hr1G034260.1	Barley	extracellular	1.33	10.14
HORVU5Hr1G070390.9	Barley	cytosol, nucleus, plastid	13.14	7.82

Protein Annotations

Gene3D:3.30.70.1170	Gene3D:3.40.50.150	MapMan:35.2	UniProt:A0A287TZC7	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0016740	GO:GO:0032259	EnsemblPlantsGene:HORVU6Hr1G038870	EnsemblPlants:HORVU6Hr1G038870.11	InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2
PFAM:PF01189	PRINTS:PR02008	PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF4	InterPro:RCMT
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000B471469	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr6H:-:200044385..200050317

Molecular Weight (calculated)

51138.9 Da

IEP (calculated)

9.840

GRAVY (calculated)

-0.097

Length

525 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXFF ARREAATVLR RVLRGDASKR SGGSIKSLVF SPSVRNKRAT
101: FALVCQTLKY LPILKEVLVS SGLFTSKWKK QEELVYVTAY DILFGQEIVV SGSVEEYIML HKDTFKIALQ KICVKRKVSN VEDLLSEKTT VKPKPRFVRV
201: NTLKTTTGSV IEVLSKMHKV DKDNIVPDML VLPPGTDMHK HPLVTDGKVL LQGKASCMVA AALSPQPGWK VIDACAAPGN KTVHLAALMN GEGSIIACEL
301: NKERAKTLQH TVRKSGANNI ETVIGDFLNI DSNDPSYAEV RAILLDPSCS GSGISTERLD HLLPSHSIDD QGDAGSSARI RKLSAFQRKA LSHALSFPSV
401: ERLVYSTCSI HQAENEDVVS SVLPLASSLG FELSTPFPQW RRRGLPVFDG AEHLLRTDPE DDLEGFFIAL FVRKAAAADA LEPSNTGGAL PRKRKRACTT
501: RSGGLRAFSS LRLSRMDVLC SIWGL

Best Arabidopsis Sequence Match ( AT5G26180.5 )
(BLAST)

001: MVARRNKPKA PLVKHRFSGG DSHKPKPPPA TKQPFSGVES HKPKTSPATK QKFSGVESHK PKTPPGKQRF SGAESRKPKT PPATKQKFSS LERSALYARR
101: EAANILRTVL RGDAERRAVA SIKSLVLSPS VRNKRGTFAL VCETLKYLTV IKDVLDIANV LNSKWKRQEP LVFIVCYDIL FGKDTPSIGD AEKFLMRHKE
201: ALLSGLATLL VRKKVDSVDQ LLGSKLTGHL KPRYVRVNTL KMDVDSAVQE LEKHYTVQKD ETVPDLLVLP PGSDLHAHRL VANGRIFLQG KASSMVAAAL
301: QPQAGWEVLD ACSAPGNKTI HLAALMEGQG KIIACELNEE RVKRLEHTIK LSGASNIEVC HGDFLGLNPK DPSFAKIRAI LLDPSCSGSG TITDRLDHLL
401: PSHSEDNNMN YDSMRLHKLA VFQKKALAHA LSFPKVERVV YSTCSIYQIE NEDVVSSVLP LASSLGFKLA TPFPQWQRRG LPVFAGSEHL LRMDPVEDKE
501: GFFIALFVRA NKLDNPKSSE LPDRVCRRRP KERTMQLHPY LCPKMFRAWS GTLHRLKTRF LLSRNGC

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.