Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24989 | Canola | plastid | 71.96 | 83.44 |
| Bra020544.1-P | Field mustard | mitochondrion, plastid | 71.78 | 83.23 |
| CDY05536 | Canola | plastid | 71.25 | 82.62 |
| CDY19785 | Canola | plastid | 69.49 | 81.41 |
| CDX87063 | Canola | plastid | 69.31 | 81.2 |
| Bra036564.1-P | Field mustard | mitochondrion | 68.96 | 80.79 |
| Solyc08g062560.2.1 | Tomato | nucleus | 50.26 | 61.96 |
| PGSC0003DMT400021199 | Potato | cytosol, plastid | 52.03 | 61.33 |
| VIT_04s0008g01480.t01 | Wine grape | plastid | 54.67 | 61.02 |
| KRH52232 | Soybean | nucleus | 50.44 | 58.25 |
| KRH61558 | Soybean | nucleus | 50.62 | 58.1 |
| Os02t0217800-00 | Rice | plastid | 50.79 | 57.03 |
| KXG29808 | Sorghum | plastid | 49.21 | 56.14 |
| Zm00001d016374_P002 | Maize | cytosol, plastid | 49.03 | 55.82 |
| TraesCS6A01G183400.2 | Wheat | plastid | 49.56 | 55.53 |
| TraesCS6B01G213900.2 | Wheat | plastid | 49.56 | 55.53 |
| TraesCS6D01G171500.1 | Wheat | plastid | 49.38 | 55.34 |
| GSMUA_Achr5P24950_001 | Banana | mitochondrion | 49.91 | 55.17 |
| HORVU6Hr1G038870.11 | Barley | cytosol | 47.44 | 51.24 |
| Solyc08g062440.1.1 | Tomato | endoplasmic reticulum | 17.81 | 46.98 |
| AT3G13180.1 | Thale cress | plastid | 14.64 | 15.87 |
| AT4G17590.1 | Thale cress | cytosol | 5.47 | 15.42 |
| AT5G55920.1 | Thale cress | nucleus | 17.64 | 14.66 |
| AT4G26600.5 | Thale cress | plastid | 17.11 | 13.82 |
| AT4G40000.1 | Thale cress | nucleus | 14.46 | 10.47 |
| AT2G22400.1 | Thale cress | cytosol | 13.93 | 9.78 |
Protein Annotations
| Gene3D:3.30.70.1170 | Gene3D:3.40.50.150 | MapMan:35.2 | EntrezGene:832687 | ProteinID:AED93533.1 | ProteinID:AED93534.1 |
| EMBL:AK117681 | ProteinID:ANM70298.1 | ProteinID:ANM70299.1 | ProteinID:ANM70300.1 | ArrayExpress:AT5G26180 | EnsemblPlantsGene:AT5G26180 |
| RefSeq:AT5G26180 | TAIR:AT5G26180 | RefSeq:AT5G26180-TAIR-G | EnsemblPlants:AT5G26180.3 | Unigene:At.30863 | EMBL:BT008590 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008173 | GO:GO:0008757 | GO:GO:0009987 | GO:GO:0016740 |
| GO:GO:0032259 | GO:GO:0070475 | InterPro:IPR001678 | InterPro:MeTrfase_RsmB/NOP2 | RefSeq:NP_001331920.1 | RefSeq:NP_001331921.1 |
| RefSeq:NP_001331922.1 | RefSeq:NP_197990.2 | RefSeq:NP_851079.1 | PFAM:PF01189 | PRINTS:PR02008 | PFscan:PS51686 |
| PANTHER:PTHR22807 | PANTHER:PTHR22807:SF4 | UniProt:Q8GYE8 | InterPro:RCMT | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 |
| UniParc:UPI00000ADDEB | SEG:seg | : | : | : | : |
Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE8]
Coordinates
chr5:+:9149144..9153503
Molecular Weight (calculated)
63177.9 Da
IEP (calculated)
10.508
GRAVY (calculated)
-0.378
Length
567 amino acids
Sequence
(BLAST)
(BLAST)
001: MVARRNKPKA PLVKHRFSGG DSHKPKPPPA TKQPFSGVES HKPKTSPATK QKFSGVESHK PKTPPGKQRF SGAESRKPKT PPATKQKFSS LERSALYARR
101: EAANILRTVL RGDAERRAVA SIKSLVLSPS VRNKRGTFAL VCETLKYLTV IKDVLDIANV LNSKWKRQEP LVFIVCYDIL FGKDTPSIGD AEKFLMRHKE
201: ALLSGLATLL VRKKVDSVDQ LLGSKLTGHL KPRYVRVNTL KMDVDSAVQE LEKHYTVQKD ETVPDLLVLP PGSDLHAHRL VANGRIFLQG KASSMVAAAL
301: QPQAGWEVLD ACSAPGNKTI HLAALMEGQG KIIACELNEE RVKRLEHTIK LSGASNIEVC HGDFLGLNPK DPSFAKIRAI LLDPSCSGSG TITDRLDHLL
401: PSHSEDNNMN YDSMRLHKLA VFQKKALAHA LSFPKVERVV YSTCSIYQIE NEDVVSSVLP LASSLGFKLA TPFPQWQRRG LPVFAGSEHL LRMDPVEDKE
501: GFFIALFVRA NKLDNPKSSE LPDRVCRRRP KERTMQLHPY LCPKMFRAWS GTLHRLKTRF LLSRNGC
101: EAANILRTVL RGDAERRAVA SIKSLVLSPS VRNKRGTFAL VCETLKYLTV IKDVLDIANV LNSKWKRQEP LVFIVCYDIL FGKDTPSIGD AEKFLMRHKE
201: ALLSGLATLL VRKKVDSVDQ LLGSKLTGHL KPRYVRVNTL KMDVDSAVQE LEKHYTVQKD ETVPDLLVLP PGSDLHAHRL VANGRIFLQG KASSMVAAAL
301: QPQAGWEVLD ACSAPGNKTI HLAALMEGQG KIIACELNEE RVKRLEHTIK LSGASNIEVC HGDFLGLNPK DPSFAKIRAI LLDPSCSGSG TITDRLDHLL
401: PSHSEDNNMN YDSMRLHKLA VFQKKALAHA LSFPKVERVV YSTCSIYQIE NEDVVSSVLP LASSLGFKLA TPFPQWQRRG LPVFAGSEHL LRMDPVEDKE
501: GFFIALFVRA NKLDNPKSSE LPDRVCRRRP KERTMQLHPY LCPKMFRAWS GTLHRLKTRF LLSRNGC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.