Factsheet for Bra020544.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05536	Canola	plastid	98.77	98.77
CDY24989	Canola	plastid	97.75	97.75
Bra036564.1-P	Field mustard	mitochondrion	85.28	86.16
AT5G26180.3	Thale cress	plastid	83.23	71.78
Solyc08g062560.2.1	Tomato	nucleus	59.3	63.04
VIT_04s0008g01480.t01	Wine grape	plastid	64.83	62.4
PGSC0003DMT400021199	Potato	cytosol, plastid	61.35	62.37
KRH52232	Soybean	nucleus	59.92	59.67
KRH61558	Soybean	nucleus	59.71	59.11
Os02t0217800-00	Rice	plastid	58.49	56.63
KXG29808	Sorghum	plastid	56.65	55.73
Zm00001d016374_P002	Maize	cytosol, plastid	56.65	55.62
GSMUA_Achr5P24950_001	Banana	mitochondrion	58.08	55.36
TraesCS6A01G183400.2	Wheat	plastid	57.26	55.34
TraesCS6B01G213900.2	Wheat	plastid	57.06	55.14
TraesCS6D01G171500.1	Wheat	plastid	56.85	54.94
HORVU6Hr1G038870.11	Barley	cytosol	55.21	51.43
Solyc08g062440.1.1	Tomato	endoplasmic reticulum	21.88	49.77
Bra022117.1-P	Field mustard	cytosol	7.57	19.68
Bra026418.1-P	Field mustard	plastid	21.06	16.07
Bra002867.1-P	Field mustard	mitochondrion, nucleus	20.86	15.48
Bra035594.1-P	Field mustard	nucleus	20.04	15.31
Bra039376.1-P	Field mustard	plastid	15.54	14.53
Bra011816.1-P	Field mustard	cytosol, mitochondrion	16.77	11.48
Bra038528.1-P	Field mustard	nucleus	15.95	9.63
Bra030242.1-P	Field mustard	nucleus	15.54	9.58

Protein Annotations

Gene3D:3.30.70.1170	Gene3D:3.40.50.150	MapMan:35.2	EnsemblPlantsGene:Bra020544	EnsemblPlants:Bra020544.1	EnsemblPlants:Bra020544.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:IPR001678	UniProt:M4DVK0
InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189	PRINTS:PR02008	PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF4
InterPro:RCMT	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0002546C91	SEG:seg	:

Description

AT5G26180 (E=2e-221) | NOL1/NOP2/sun family protein

Coordinates

chrA02:+:24670500..24673875

Molecular Weight (calculated)

54761.4 Da

IEP (calculated)

10.114

GRAVY (calculated)

-0.286

Length

489 amino acids

Sequence
(BLAST)

001: MARHKSNAPP KLTQQPRKPQ QSSGAERSAL YARREAAKVL HTVLRGDAER RAVASIKSLV FSPSVRNKRG TFALVCETLK YLDVIKDVLE IANVLNSKWK
101: RQEPLVYIIC YDILFGKETP SIGDAEKFLM RRKDALLSGL ATLLVRKKVK SVEELLDLSQ LNGHIKQRYV RVNTLKMDVD SAVKELEKLY KVQKDETVPD
201: LLVMPPGSDL HAHPLVMNGR IFLQGKGSSM VAAALQPEAG WEVIDACSAP GNKTVHLASL MKGQGKIIAC ELNEERVKRL EQTIKLSGAT NIEVFHGDFL
301: SLNPTDPSFA KVRAILLDPS CSGSGTITDR LDHLLPSHSA DNTNYDSIRL HKLAVFQKKA LAHALSFPQV ERVVYSTCSI HQIENEDVVS SLLPLASSLG
401: FKLATPFPQW QRRGLPVFAG SEHLLRMDPV EDKEGFFIAL FTKTNNLDNP KASELPEGEC RGRRKRFYPF LWPKVFFRAW NGRLHGSRR

Best Arabidopsis Sequence Match ( AT5G26180.5 )
(BLAST)

001: MVARRNKPKA PLVKHRFSGG DSHKPKPPPA TKQPFSGVES HKPKTSPATK QKFSGVESHK PKTPPGKQRF SGAESRKPKT PPATKQKFSS LERSALYARR
101: EAANILRTVL RGDAERRAVA SIKSLVLSPS VRNKRGTFAL VCETLKYLTV IKDVLDIANV LNSKWKRQEP LVFIVCYDIL FGKDTPSIGD AEKFLMRHKE
201: ALLSGLATLL VRKKVDSVDQ LLGSKLTGHL KPRYVRVNTL KMDVDSAVQE LEKHYTVQKD ETVPDLLVLP PGSDLHAHRL VANGRIFLQG KASSMVAAAL
301: QPQAGWEVLD ACSAPGNKTI HLAALMEGQG KIIACELNEE RVKRLEHTIK LSGASNIEVC HGDFLGLNPK DPSFAKIRAI LLDPSCSGSG TITDRLDHLL
401: PSHSEDNNMN YDSMRLHKLA VFQKKALAHA LSFPKVERVV YSTCSIYQIE NEDVVSSVLP LASSLGFKLA TPFPQWQRRG LPVFAGSEHL LRMDPVEDKE
501: GFFIALFVRA NKLDNPKSSE LPDRVCRRRP KERTMQLHPY LCPKMFRAWS GTLHRLKTRF LLSRNGC

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.