Factsheet for TraesCS6D01G171500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G213900.2	Wheat	plastid	98.22	98.22
TraesCS6A01G183400.2	Wheat	plastid	97.83	97.83
HORVU6Hr1G038870.11	Barley	cytosol	88.14	84.95
Os02t0217800-00	Rice	plastid	79.84	80.0
KXG29808	Sorghum	plastid	77.27	78.67
Zm00001d016374_P002	Maize	cytosol, plastid	76.88	78.11
Solyc08g062560.2.1	Tomato	nucleus	53.75	59.13
GSMUA_Achr5P24950_001	Banana	mitochondrion	59.29	58.48
PGSC0003DMT400021199	Potato	cytosol, plastid	54.55	57.38
CDY05536	Canola	plastid	55.14	57.06
Bra020544.1-P	Field mustard	mitochondrion, plastid	54.94	56.85
CDY24989	Canola	plastid	54.74	56.65
CDY19785	Canola	plastid	53.95	56.41
CDX87063	Canola	plastid	53.75	56.2
Bra036564.1-P	Field mustard	mitochondrion	53.75	56.2
VIT_04s0008g01480.t01	Wine grape	plastid	56.32	56.1
KRH52232	Soybean	nucleus	50.0	51.53
KRH61558	Soybean	nucleus	49.8	51.01
AT5G26180.3	Thale cress	plastid	55.34	49.38
Solyc08g062440.1.1	Tomato	endoplasmic reticulum	17.0	40.0
TraesCS5D01G260700.1	Wheat	mitochondrion	15.81	14.06
TraesCS6D01G267300.1	Wheat	plastid	17.19	11.34
TraesCS4D01G060100.1	Wheat	plastid	15.81	9.65
TraesCS5D01G256900.1	Wheat	cytosol	14.82	8.59

Protein Annotations

EnsemblPlants:TraesCS6D01G171500.1	EnsemblPlantsGene:TraesCS6D01G171500	Gene3D:3.30.70.1170	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2
InterPro:RCMT	InterPro:SAM-dependent_MTases	PANTHER:PTHR22807	PANTHER:PTHR22807:SF4	PFAM:PF01189	PFscan:PS51686
PRINTS:PR02008	SEG:seg	SUPFAM:SSF53335	TIGR:cd02440	MapMan:35.2	:

Description

No Description!

Coordinates

chr6D:+:157928226..157933599

Molecular Weight (calculated)

55439.0 Da

IEP (calculated)

10.031

GRAVY (calculated)

-0.215

Length

506 amino acids

Sequence
(BLAST)

001: MPPPLKNRSH APAKVGQSRP PPRQPGRWMA SRDAGERAAF FARREAATVL RRVLRGDASK RSGGSIKSLV FSPSVRNKRA TFALVCQTLK YLPILKEVLA
101: SSGVFSSKWK KQEELVYVTA YDILFGQEIA VSGSVEEYIM LHKDTFRTAL QKICVKRKVS NVEDLLSEKT TVKPKPRFVR VNTLKTTTGS VIEVLSKMHK
201: VDKDDMVPDM LVLPPGTDMH KHPLVTDGKV FLQGKASCMV AAALSPKPGW KVIDACAAPG NKTVHLAALM NGEGSIIACE LNKERAKTLQ HTVRRSGANN
301: IETVIGDFLN IDTNDPSYAE VRAILLDPSC SGSGISTERL DHLLPSYSID DQDDAGSSAR IRKLSAFQRK ALSHALSFPS VERLVYSTCS IHQAENEDVV
401: SSVLPLASSL GFELATPFPQ WMRRGLPVFD GAQHLLRTDP EDDLEGFFIA LFVRKAAAAD ALEPSEDGGA LGRKRKRACT TRSGGLRAFS SLRLSRMDVL
501: CSIWGI

Best Arabidopsis Sequence Match ( AT5G26180.5 )
(BLAST)

001: MVARRNKPKA PLVKHRFSGG DSHKPKPPPA TKQPFSGVES HKPKTSPATK QKFSGVESHK PKTPPGKQRF SGAESRKPKT PPATKQKFSS LERSALYARR
101: EAANILRTVL RGDAERRAVA SIKSLVLSPS VRNKRGTFAL VCETLKYLTV IKDVLDIANV LNSKWKRQEP LVFIVCYDIL FGKDTPSIGD AEKFLMRHKE
201: ALLSGLATLL VRKKVDSVDQ LLGSKLTGHL KPRYVRVNTL KMDVDSAVQE LEKHYTVQKD ETVPDLLVLP PGSDLHAHRL VANGRIFLQG KASSMVAAAL
301: QPQAGWEVLD ACSAPGNKTI HLAALMEGQG KIIACELNEE RVKRLEHTIK LSGASNIEVC HGDFLGLNPK DPSFAKIRAI LLDPSCSGSG TITDRLDHLL
401: PSHSEDNNMN YDSMRLHKLA VFQKKALAHA LSFPKVERVV YSTCSIYQIE NEDVVSSVLP LASSLGFKLA TPFPQWQRRG LPVFAGSEHL LRMDPVEDKE
501: GFFIALFVRA NKLDNPKSSE LPDRVCRRRP KERTMQLHPY LCPKMFRAWS GTLHRLKTRF LLSRNGC

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.