CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19785	Canola	plastid	95.45	95.45
CDY24989	Canola	plastid	86.78	85.89
CDY05536	Canola	plastid	85.95	85.07
AT5G26180.3	Thale cress	plastid	81.2	69.31
Solyc08g062560.2.1	Tomato	nucleus	59.09	62.17
PGSC0003DMT400021199	Potato	cytosol, plastid	61.16	61.54
VIT_04s0008g01480.t01	Wine grape	plastid	63.43	60.43
KRH52232	Soybean	nucleus	59.3	58.45
KRH61558	Soybean	nucleus	59.3	58.1
Os02t0217800-00	Rice	plastid	57.64	55.25
KXG29808	Sorghum	plastid	56.41	54.93
Zm00001d016374_P002	Maize	cytosol, plastid	56.2	54.62
TraesCS6A01G183400.2	Wheat	plastid	56.41	53.95
TraesCS6B01G213900.2	Wheat	plastid	56.41	53.95
TraesCS6D01G171500.1	Wheat	plastid	56.2	53.75
GSMUA_Achr5P24950_001	Banana	mitochondrion	54.75	51.66
HORVU6Hr1G038870.11	Barley	cytosol	54.55	50.29
Solyc08g062440.1.1	Tomato	endoplasmic reticulum	22.11	49.77
CDY28964	Canola	cytosol	6.82	24.63
CDX85924	Canola	cytosol	6.4	23.85
CDY66223	Canola	mitochondrion	9.5	18.04
CDY06532	Canola	cytosol	12.6	16.31
CDX94307	Canola	plastid	20.66	15.7
CDX89321	Canola	plastid	20.04	15.18
CDY06550	Canola	nucleus	19.63	15.01
CDY28628	Canola	nucleus	20.25	14.96
CDY68035	Canola	nucleus	19.83	14.84
CDY17367	Canola	mitochondrion, nucleus	20.25	14.65
CDY24205	Canola	plastid	15.7	14.62
CDY43364	Canola	plastid	15.5	14.34
CDY65896	Canola	nucleus	5.79	12.28
CDY62126	Canola	cytosol	5.79	12.23
CDX91690	Canola	cytosol, plastid	5.17	12.2
CDY68255	Canola	cytosol, mitochondrion	17.36	11.76
CDX69365	Canola	cytosol	17.36	11.6
CDY15291	Canola	nucleus	3.51	10.97
CDY17518	Canola	cytosol	4.55	10.73
CDX89460	Canola	nucleus	16.12	9.97
CDX76928	Canola	nucleus	16.53	9.91
CDY25593	Canola	nucleus	16.12	9.84
CDY13765	Canola	nucleus	16.12	9.63

Protein Annotations

KEGG:00564+2.1.1.17	Gene3D:3.30.70.1170	Gene3D:3.40.50.150	MapMan:35.2	GO:A0A078DIG6	EnsemblPlants:CDX87063
ProteinID:CDX87063	ProteinID:CDX87063.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00145951001	InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189
PRINTS:PR02008	PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF4	MetaCyc:PWY-6825	InterPro:RCMT
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0004EF3837	SEG:seg	:	:

Description

BnaC09g03780D

Coordinates

chrLK031849:-:246135..249046

Molecular Weight (calculated)

53836.2 Da

IEP (calculated)

10.046

GRAVY (calculated)

-0.298

Length

484 amino acids

Sequence
(BLAST)

001: MARRKSNAPP KATRQPAKQK FSSAERSSLY ASREAAKVLG TALRGDAERR AVASIKSLVF SPSVRNKRGT FALVCETLKH LTVIKEVLEI ANALNSKWKR
101: QEPLVYIICY DILFGKEPPL IGDAEKFLMK RKDALVSSLA TLLVRKKAET VDKLLGVSQL NGPLKPRYVH VNTLKMDVDS AVQELGKLYK VQKDETVPDL
201: LVMPPGSDLH AHHLVKNGRT FLQGKGSAMV AVALQPEADW EVIDACAAPG NKTINLAALM KGQGKIIACE LNEERVKRLE QTIKLSGATN IEVSHGDFLG
301: LNPEDPSFAK VRAILLDPSC SGSGTITDRL DHLLPSHSAD NQNYDSIRLH KLAVFQKKAL AHALSFPQVE RVVYSTCSIH QIENEDVVSS VLPLASSLGF
401: ELATPFPQWQ RRGLPVLAGS EHLLRMDPEE DKEGFFIALF TKTSKLENSN SSEIPERECR RRRKQGHPFL WPKVFFRAWN GRMR

Best Arabidopsis Sequence Match ( AT5G26180.5 )
(BLAST)

001: MVARRNKPKA PLVKHRFSGG DSHKPKPPPA TKQPFSGVES HKPKTSPATK QKFSGVESHK PKTPPGKQRF SGAESRKPKT PPATKQKFSS LERSALYARR
101: EAANILRTVL RGDAERRAVA SIKSLVLSPS VRNKRGTFAL VCETLKYLTV IKDVLDIANV LNSKWKRQEP LVFIVCYDIL FGKDTPSIGD AEKFLMRHKE
201: ALLSGLATLL VRKKVDSVDQ LLGSKLTGHL KPRYVRVNTL KMDVDSAVQE LEKHYTVQKD ETVPDLLVLP PGSDLHAHRL VANGRIFLQG KASSMVAAAL
301: QPQAGWEVLD ACSAPGNKTI HLAALMEGQG KIIACELNEE RVKRLEHTIK LSGASNIEVC HGDFLGLNPK DPSFAKIRAI LLDPSCSGSG TITDRLDHLL
401: PSHSEDNNMN YDSMRLHKLA VFQKKALAHA LSFPKVERVV YSTCSIYQIE NEDVVSSVLP LASSLGFKLA TPFPQWQRRG LPVFAGSEHL LRMDPVEDKE
501: GFFIALFVRA NKLDNPKSSE LPDRVCRRRP KERTMQLHPY LCPKMFRAWS GTLHRLKTRF LLSRNGC

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.