CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91690	Canola	cytosol, plastid	26.2	47.8
CDY62126	Canola	cytosol	26.47	43.23
VIT_19s0015g00830.t01	Wine grape	nucleus	40.91	42.5
CDY17518	Canola	cytosol	23.26	42.44
CDY65896	Canola	nucleus	25.13	41.23
KRH75188	Soybean	cytosol	32.62	38.98
CDX89321	Canola	plastid	59.09	34.59
CDX94307	Canola	plastid	58.56	34.38
CDY06550	Canola	nucleus	53.48	31.6
KRH46413	Soybean	nucleus	50.8	30.94
CDY68035	Canola	nucleus	53.48	30.91
KRG98455	Soybean	nucleus	50.8	30.65
CDY28628	Canola	nucleus	53.48	30.53
PGSC0003DMT400057532	Potato	nucleus	50.8	29.83
CDY17367	Canola	mitochondrion, nucleus	53.21	29.75
GSMUA_Achr7P20140_001	Banana	nucleus	45.45	28.38
Solyc07g052110.2.1	Tomato	nucleus	50.53	26.77
Os02t0724600-01	Rice	nucleus	44.12	23.81
Os09t0551300-02	Rice	nucleus	43.85	23.46
KXG30856	Sorghum	nucleus, plastid	43.32	23.41
Zm00001d051652_P003	Maize	plasma membrane	43.32	22.56
Zm00001d017887_P004	Maize	plastid	43.85	22.34
HORVU6Hr1G072030.1	Barley	plastid	43.58	21.56
TraesCS6B01G315600.1	Wheat	plastid	43.32	21.2
TraesCS6D01G267300.1	Wheat	plastid	43.32	21.12
TraesCS6A01G286600.1	Wheat	nucleus	43.32	20.96
CDY24989	Canola	plastid	17.11	13.09
CDY05536	Canola	plastid	17.11	13.09
CDY19785	Canola	plastid	16.58	12.81
CDX87063	Canola	plastid	16.31	12.6
CDY24205	Canola	plastid	16.31	11.73
CDY43364	Canola	plastid	16.31	11.66
CDY66223	Canola	mitochondrion	7.75	11.37
VIT_19s0015g00840.t01	Wine grape	nucleus	6.42	9.34
CDY15291	Canola	nucleus	2.94	7.1
CDX69365	Canola	cytosol	13.37	6.91
CDY68255	Canola	cytosol, mitochondrion	12.83	6.72
CDY28964	Canola	cytosol	2.41	6.72
CDX85924	Canola	cytosol	2.14	6.15
CDX89460	Canola	nucleus	12.57	6.01
CDY25593	Canola	nucleus	12.57	5.93
CDX76928	Canola	nucleus	12.3	5.7
CDY13765	Canola	nucleus	12.3	5.68

Protein Annotations

KEGG:00564+2.1.1.17	MapMan:17.1.2.2.3.6	Gene3D:3.30.70.1170	Gene3D:3.40.50.150	GO:A0A078F094	EnsemblPlants:CDY06532
ProteinID:CDY06532	ProteinID:CDY06532.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00122650001	InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189
PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF30	MetaCyc:PWY-6825	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
UniParc:UPI0004EE55E5	SEG:seg	:	:	:	:

Description

BnaC02g12560D

Coordinates

chrLK031971:+:172655..175600

Molecular Weight (calculated)

42711.7 Da

IEP (calculated)

10.790

GRAVY (calculated)

-0.329

Length

374 amino acids

Sequence
(BLAST)

001: MYLFVDELNN KKTNTSVVVK VLNTFIFIHF FKQSKQIIGG SNLKLVYIHQ ISKQIDYEDF IRLKIGTKLN KLELKELEEE ASGPPDLPAL QTRIKEIVRV
101: LSNFKDLRPE GVKRKKFVEQ LKADLAFEKQ RPTSIRTNTL KVNLVVQLYS GVSLSKCFSV VETRRRDLAD VLLNRGVNLD PLSKWSKVGL VVYDSQVPIG
201: ATPEYLAGFY MLQSASSFLP VMALAPREKE RVVDMAAAPG GKTTYVASLM KNTGIIYANE MKVPWLKSLT ANLHRMGITH KRKGGRPLGS RNKPKVHQIC
301: DPPTFKPKFY DLRQKNRRGM RKAILLSKRT SSHKVYVLHQ NPMVYTLQEL RRKINAPYLK PKITQSLHAQ NVVH

Best Arabidopsis Sequence Match ( AT4G26600.1 )
(BLAST)

001: MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPENEAVIDY ALKNRDVKLV
501: PCGLDFGRPG FSSFREHRFH PSLEKTRRFY PHVHNMDGFF VAKLKKMSNA MQPSGNDEPA VTMEQAQVSS SDDDDEKAEA IEELEKPPVA SGQPKRESNT
601: KEDTNKRKNP RSKEIHKGKR NKNTKTESGN VEEPRKQKKK RSQWKNEIAQ AREEKRKTMR ENAKETPKHR G

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.