CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030242.1-P	Field mustard	nucleus	97.86	97.86
CDX89460	Canola	nucleus	96.09	97.44
CDY13765	Canola	nucleus	89.41	87.53
CDX76928	Canola	nucleus	88.78	87.24
CDY15291	Canola	nucleus	16.65	85.16
AT2G22400.1	Thale cress	cytosol	84.62	83.04
CDX69365	Canola	cytosol	63.93	70.03
CDY68255	Canola	cytosol, mitochondrion	62.93	69.89
KRH59299	Soybean	cytosol	27.87	69.5
VIT_07s0191g00040.t01	Wine grape	nucleus	61.79	58.54
KRH43150	Soybean	nucleus	59.9	57.93
KRH31314	Soybean	cytosol	58.39	56.74
Solyc05g051520.2.1	Tomato	nucleus	57.0	54.92
Solyc11g010110.1.1	Tomato	nucleus	60.15	54.33
PGSC0003DMT400041672	Potato	nucleus	60.03	54.21
GSMUA_Achr7P19120_001	Banana	nucleus	55.61	53.0
TraesCS5B01G247600.1	Wheat	cytosol, mitochondrion	54.98	49.94
TraesCS5A01G249700.1	Wheat	cytosol	54.98	49.89
TraesCS5D01G256900.1	Wheat	cytosol	54.73	49.71
EER96904	Sorghum	nucleus	54.6	49.54
Os09t0471900-01	Rice	nucleus	54.35	48.98
KRH59300	Soybean	mitochondrion	29.89	48.87
Zm00001d020810_P002	Maize	nucleus	54.73	48.82
KRG97553	Soybean	extracellular, plasma membrane	24.09	46.47
KXG25732	Sorghum	mitochondrion	49.05	46.04
Zm00001d031265_P029	Maize	mitochondrion	47.41	45.58
TraesCS4D01G060100.1	Wheat	plastid	46.66	44.63
TraesCS4A01G254100.3	Wheat	mitochondrion	46.78	44.59
TraesCS4B01G060400.1	Wheat	mitochondrion, plastid	46.66	44.42
KRH45277	Soybean	cytosol	5.04	36.36
CDY28964	Canola	cytosol	4.29	25.37
CDX85924	Canola	cytosol	4.04	24.62
CDX87063	Canola	plastid	9.84	16.12
CDY19785	Canola	plastid	9.84	16.12
CDY06550	Canola	nucleus	12.86	16.11
CDY66223	Canola	mitochondrion	5.17	16.08
CDY68035	Canola	nucleus	12.86	15.77
CDY05536	Canola	plastid	9.58	15.54
CDX94307	Canola	plastid	12.48	15.54
CDX89321	Canola	plastid	12.48	15.49
CDY24989	Canola	plastid	9.46	15.34
CDY28628	Canola	nucleus	12.48	15.11
CDY17367	Canola	mitochondrion, nucleus	12.48	14.8
CDY43364	Canola	plastid	9.46	14.34
CDY24205	Canola	plastid	9.33	14.23
CDY06532	Canola	cytosol	5.93	12.57
CDX91690	Canola	cytosol, plastid	2.4	9.27
CDY17518	Canola	cytosol	2.27	8.78
CDY62126	Canola	cytosol	2.52	8.73
CDY65896	Canola	nucleus	2.27	7.89
HORVU6Hr1G034260.1	Barley	extracellular	0.63	7.25

Protein Annotations

KEGG:00564+2.1.1.17	MapMan:16.6.7.8	Gene3D:3.40.50.150	GO:A0A078GLX2	UniProt:A0A078GLX2	EnsemblPlants:CDY25593
ProteinID:CDY25593	ProteinID:CDY25593.1	InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016428	GO:GO:0016740	GO:GO:0030488	GO:GO:0032259	EnsemblPlantsGene:GSBRNA2T00032858001
InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189	PRINTS:PR02008	PRINTS:PR02011	ScanProsite:PS01153
PFscan:PS51686	PANTHER:PTHR22808	PANTHER:PTHR22808:SF14	MetaCyc:PWY-6825	InterPro:RCMT	InterPro:RCMT_NCL1
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0004EF2174	SEG:seg	:	:

Description

BnaA04g12850DBnaA04g12850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLX2]

Coordinates

chrLK032177:-:97662..101476

Molecular Weight (calculated)

88621.5 Da

IEP (calculated)

5.624

GRAVY (calculated)

-0.492

Length

793 amino acids

Sequence
(BLAST)

001: MGRGRQRGRS QRKHFKESRE NVWKRPKSDA PDNAAVADKP TWEPFLTDNP NFEEYYKEQG IVKAEEWELF MEFLRKPLPA AFRVNSNSQF CDEIISILEN
101: DFVKSLHAEA IEGGEMEAIK PLPWYPKNLA WHSNFSRKEI RKNKILERFH EFLKLENEVG NMTRQEAVSM VPPLFLDVHP DHFVLDMCAA PGSKTFQLLE
201: IIHGASEPGT LPNGMVVAND VDFQRSNLLI HQTKRMCTAN LMVTNHEGQQ FPGCRLKGPS DDLPINQLSF DRVLCDVPCS GDGTLRKAPD IWRKWNSGMG
301: NGLHSLQVIL AMRGLSLLKV GGKMIYSTCS MNPVEDEAVV AEILRRCGDS VELVDVSDKL PELIRRPGLK TWKVRDKGGW FTSYKDVPQN RRGGVIVSMF
401: PSGKNLKDST ETTQENENGG VQNECKETEN SVVDAIPDEP IVEVSDLPLE RCMRIVPHDQ NTGAFFIAVL HKVSPLPEFQ EKPNPRKHSS KKNADSTVKS
501: PPEEAVVSAN TEPVESPVET VIEEDANNEK DDSLVEPEKQ TTEGETTITE EKEANPPSQA GGKRKVPMQG RWKGFDPVVF LKEETLIDSI KEFYGIKDES
601: FPLNGHLVTR NTDTSSVKRI YYVSKSVKEV LQLNFAVGQQ LKIASVGLKM FERQSAKEGS SKPCSFRISA EGLPVILPYI TKQVLYTPMA DFKHLLEHKS
701: IRFPDFVNPQ LSQKATELVL GCCVVILSDG EEPVKADAST IAISCWRGNN SLAVMITPAD CQELLERLAE RTPKTGGGSV DGNNGDSVAM ETA

Best Arabidopsis Sequence Match ( AT2G22400.1 )
(BLAST)

001: MGRGGRHRGR TQRKDFKESR ENVWKRPKSD ASVDGSDNAV PEQKPTWEPI VTVNPNFEEY YKKQGIVKAE EWDLFMEILR KPLPAAFRVN SNGQFCDEII
101: SILENDFMKS LQAEAIEGGE LEAIKPLPWY PKNLAWHSNF SRKEIRKNQT LERFHEFLKL ENEVGNITRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT
201: FQLLEIIHEA SEPGSLPNGL VVANDVDFKR SNLLIHQTKR MCTSNLIVTN HEGQQFPGCR LNKSRASEKG ISENMPINQL AFDRVLCDVP CSGDGTLRKA
301: PDIWRKWNSG MGNGLHSLQI ILAMRGLSLL KVGGKMIYST CSMNPVEDEA VVAEILRRCG DSVELLDVSD KLPELIRRPG LKAWKVRDKG GWFTSYKDVP
401: QNRRGGVLVS MFPSGKYLKD STETTEKNEN GDVNGCEDGL KETDISVVDA TPEEQAEEVS DLPLERCMRI IPHDQNTGAF FIAVLQKKSP LPEFQEKPNT
501: KRNSTAKSTD STEKSPSKES VVTVDAGVPD ESAVEKVIEA DSNIEKNDSL EPEKKITEGE SITEDKEANS SNAGGKRKVP MQGKWKGFDP VVFVKDETVI
601: NGIKEFYGIK DESFPLHGHL VARNTDTSSV KRIYYVSKSV KEVLQLNFAV GQQLKIASVG LKMFERQSAK EGSSTLCPFR ISSEGLPVIL PYITKQVLYT
701: PMADFKLLLQ DKSIKFHDFV NPQLAQKATD LVMGSCVVIL SDGEVPVKAD ASTIAISCWR GKASLAVMAT VADCQELLER FAEKTPKTEG GSVNGSNGDS
801: DGPLAMET

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L601]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.