Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400041672 | Potato | nucleus | 97.27 | 97.27 |
| Solyc05g051520.2.1 | Tomato | nucleus | 66.97 | 71.45 |
| VIT_07s0191g00040.t01 | Wine grape | nucleus | 59.68 | 62.6 |
| CDX89460 | Canola | nucleus | 54.21 | 60.87 |
| CDY25593 | Canola | nucleus | 54.33 | 60.15 |
| Bra030242.1-P | Field mustard | nucleus | 53.99 | 59.77 |
| Bra011816.1-P | Field mustard | cytosol, mitochondrion | 48.41 | 59.52 |
| CDY68255 | Canola | cytosol, mitochondrion | 48.41 | 59.52 |
| CDX76928 | Canola | nucleus | 54.44 | 59.23 |
| CDY13765 | Canola | nucleus | 54.33 | 58.89 |
| AT2G22400.1 | Thale cress | cytosol | 54.1 | 58.79 |
| Bra038528.1-P | Field mustard | nucleus | 54.21 | 58.77 |
| CDX69365 | Canola | cytosol | 48.41 | 58.7 |
| CDY15291 | Canola | nucleus | 10.14 | 57.42 |
| AT4G40000.1 | Thale cress | nucleus | 49.66 | 55.68 |
| GSMUA_Achr7P19120_001 | Banana | nucleus | 51.48 | 54.33 |
| TraesCS5D01G256900.1 | Wheat | cytosol | 51.82 | 52.12 |
| TraesCS5B01G247600.1 | Wheat | cytosol, mitochondrion | 51.82 | 52.12 |
| TraesCS5A01G249700.1 | Wheat | cytosol | 51.59 | 51.83 |
| Os09t0471900-01 | Rice | nucleus | 51.71 | 51.59 |
| EER96904 | Sorghum | nucleus | 51.14 | 51.37 |
| Zm00001d020810_P002 | Maize | nucleus | 51.03 | 50.39 |
| KXG25732 | Sorghum | mitochondrion | 45.33 | 47.1 |
| TraesCS4A01G254100.3 | Wheat | mitochondrion | 44.08 | 46.51 |
| TraesCS4D01G060100.1 | Wheat | plastid | 43.85 | 46.44 |
| Zm00001d031265_P029 | Maize | mitochondrion | 43.62 | 46.42 |
| TraesCS4B01G060400.1 | Wheat | mitochondrion, plastid | 43.62 | 45.98 |
| KRH45277 | Soybean | cytosol | 5.35 | 42.73 |
| Solyc07g052110.2.1 | Tomato | nucleus | 12.64 | 15.72 |
| Solyc08g062560.2.1 | Tomato | nucleus | 7.97 | 15.22 |
| Solyc12g015710.1.1 | Tomato | cytosol | 8.31 | 12.94 |
| Solyc08g062440.1.1 | Tomato | endoplasmic reticulum | 2.73 | 11.16 |
| HORVU6Hr1G034260.1 | Barley | extracellular | 0.34 | 4.35 |
Protein Annotations
| MapMan:16.6.7.8 | InterPro:Fmu/NOL1/Nop2p_CS | GO:GO:0001510 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0009987 | GO:GO:0016428 | GO:GO:0016740 | GO:GO:0030488 | GO:GO:0032259 | InterPro:IPR001678 |
| UniProt:K4D5H2 | InterPro:MeTrfase_RsmB/NOP2 | PFAM:PF01189 | PRINTS:PR02008 | PRINTS:PR02011 | ScanProsite:PS01153 |
| PFscan:PS51686 | PANTHER:PTHR22808 | PANTHER:PTHR22808:SF14 | InterPro:RCMT | InterPro:RCMT_NCL1 | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF53335 | EnsemblPlantsGene:Solyc11g010110.1 | EnsemblPlants:Solyc11g010110.1.1 | UniParc:UPI00027694DA | SEG:seg | : |
Description
No Description!
Coordinates
chr11:-:3225347..3233598
Molecular Weight (calculated)
98372.5 Da
IEP (calculated)
5.397
GRAVY (calculated)
-0.551
Length
878 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGRGRSRTQ RKHFRQSREN VWKRSKHDDS GEKQDSVTTT NDGNKEHRHW EPFATQNLAF DDYYKEQGIL PTEEWDTFIG FLRTPLPAAF RINSSAQCYV
101: DIRTKLENDF MKSLQAEGVD GSEIEGIKPL PWYPENLAWQ SNFSRNQLRK NQILERFHEF LKLQNEIGNI TRQEAVSMVP PLFLDVRPDH FALDMCAAPG
201: SKTFQLLEMI HHLAEPGTLP SGMVIANDVD VQRCNLLIHQ TKRMSTANLI VTNHEAQHFP SCRLDRNFAN GSETPTVREL DINQLQFDRV LCDVPCSGDG
301: TLRKAPDIWR KWNAGNGNGL HGLQIQIAMR GLSLLKVGGR MVYSTCSMNP IENEAVVAEI LRRCGESVEL VDVSSEVPQL IRRPGLKKWK VRDKGAWWTS
401: YKDVPEGRRN AIVPGMFPSG KTYLDVSEKN DDATRDQLSD NGNNANGIEV LEDPATAATI SDKEVSTLPL ERCMRIVPHD QNSGAFFVSV FQKLSPLPAA
501: AFQQKKPVSS RGKPKSSDVI QAESLTTKVK EDVNVEDVKP VDSVGTQEVT MDDADIQDES VTTKVKEDED TEDVKPVDSV VSEDVTMDGA GNGTDETALD
601: TEPSEILEKT EKEETQPSTD TRAEPETGRG KRKLQMQGKW RGVDPVIFYK EEAVVSKIKD FYGIKESFLF EGHLITRNSD MNHVKRIYYV SKSVKEVLHL
701: NFLAGQQLKI ASVGLKMFER QTSKDGASAP CIFRISSEGL PLMLPHITKQ ILYASPTDFK HLLQYKSIKL GDFVDAEFGE KASQLLMGCC VVVLNKENKT
801: LSEAQADPST IAIGCWRGRA NISVMVTALD CQELLERMSM GVEEETKASS PEIKPSTNKA DEIVEAVEDE VTKNTKQP
101: DIRTKLENDF MKSLQAEGVD GSEIEGIKPL PWYPENLAWQ SNFSRNQLRK NQILERFHEF LKLQNEIGNI TRQEAVSMVP PLFLDVRPDH FALDMCAAPG
201: SKTFQLLEMI HHLAEPGTLP SGMVIANDVD VQRCNLLIHQ TKRMSTANLI VTNHEAQHFP SCRLDRNFAN GSETPTVREL DINQLQFDRV LCDVPCSGDG
301: TLRKAPDIWR KWNAGNGNGL HGLQIQIAMR GLSLLKVGGR MVYSTCSMNP IENEAVVAEI LRRCGESVEL VDVSSEVPQL IRRPGLKKWK VRDKGAWWTS
401: YKDVPEGRRN AIVPGMFPSG KTYLDVSEKN DDATRDQLSD NGNNANGIEV LEDPATAATI SDKEVSTLPL ERCMRIVPHD QNSGAFFVSV FQKLSPLPAA
501: AFQQKKPVSS RGKPKSSDVI QAESLTTKVK EDVNVEDVKP VDSVGTQEVT MDDADIQDES VTTKVKEDED TEDVKPVDSV VSEDVTMDGA GNGTDETALD
601: TEPSEILEKT EKEETQPSTD TRAEPETGRG KRKLQMQGKW RGVDPVIFYK EEAVVSKIKD FYGIKESFLF EGHLITRNSD MNHVKRIYYV SKSVKEVLHL
701: NFLAGQQLKI ASVGLKMFER QTSKDGASAP CIFRISSEGL PLMLPHITKQ ILYASPTDFK HLLQYKSIKL GDFVDAEFGE KASQLLMGCC VVVLNKENKT
801: LSEAQADPST IAIGCWRGRA NISVMVTALD CQELLERMSM GVEEETKASS PEIKPSTNKA DEIVEAVEDE VTKNTKQP
001: MGRGGRHRGR TQRKDFKESR ENVWKRPKSD ASVDGSDNAV PEQKPTWEPI VTVNPNFEEY YKKQGIVKAE EWDLFMEILR KPLPAAFRVN SNGQFCDEII
101: SILENDFMKS LQAEAIEGGE LEAIKPLPWY PKNLAWHSNF SRKEIRKNQT LERFHEFLKL ENEVGNITRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT
201: FQLLEIIHEA SEPGSLPNGL VVANDVDFKR SNLLIHQTKR MCTSNLIVTN HEGQQFPGCR LNKSRASEKG ISENMPINQL AFDRVLCDVP CSGDGTLRKA
301: PDIWRKWNSG MGNGLHSLQI ILAMRGLSLL KVGGKMIYST CSMNPVEDEA VVAEILRRCG DSVELLDVSD KLPELIRRPG LKAWKVRDKG GWFTSYKDVP
401: QNRRGGVLVS MFPSGKYLKD STETTEKNEN GDVNGCEDGL KETDISVVDA TPEEQAEEVS DLPLERCMRI IPHDQNTGAF FIAVLQKKSP LPEFQEKPNT
501: KRNSTAKSTD STEKSPSKES VVTVDAGVPD ESAVEKVIEA DSNIEKNDSL EPEKKITEGE SITEDKEANS SNAGGKRKVP MQGKWKGFDP VVFVKDETVI
601: NGIKEFYGIK DESFPLHGHL VARNTDTSSV KRIYYVSKSV KEVLQLNFAV GQQLKIASVG LKMFERQSAK EGSSTLCPFR ISSEGLPVIL PYITKQVLYT
701: PMADFKLLLQ DKSIKFHDFV NPQLAQKATD LVMGSCVVIL SDGEVPVKAD ASTIAISCWR GKASLAVMAT VADCQELLER FAEKTPKTEG GSVNGSNGDS
801: DGPLAMET
101: SILENDFMKS LQAEAIEGGE LEAIKPLPWY PKNLAWHSNF SRKEIRKNQT LERFHEFLKL ENEVGNITRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT
201: FQLLEIIHEA SEPGSLPNGL VVANDVDFKR SNLLIHQTKR MCTSNLIVTN HEGQQFPGCR LNKSRASEKG ISENMPINQL AFDRVLCDVP CSGDGTLRKA
301: PDIWRKWNSG MGNGLHSLQI ILAMRGLSLL KVGGKMIYST CSMNPVEDEA VVAEILRRCG DSVELLDVSD KLPELIRRPG LKAWKVRDKG GWFTSYKDVP
401: QNRRGGVLVS MFPSGKYLKD STETTEKNEN GDVNGCEDGL KETDISVVDA TPEEQAEEVS DLPLERCMRI IPHDQNTGAF FIAVLQKKSP LPEFQEKPNT
501: KRNSTAKSTD STEKSPSKES VVTVDAGVPD ESAVEKVIEA DSNIEKNDSL EPEKKITEGE SITEDKEANS SNAGGKRKVP MQGKWKGFDP VVFVKDETVI
601: NGIKEFYGIK DESFPLHGHL VARNTDTSSV KRIYYVSKSV KEVLQLNFAV GQQLKIASVG LKMFERQSAK EGSSTLCPFR ISSEGLPVIL PYITKQVLYT
701: PMADFKLLLQ DKSIKFHDFV NPQLAQKATD LVMGSCVVIL SDGEVPVKAD ASTIAISCWR GKASLAVMAT VADCQELLER FAEKTPKTEG GSVNGSNGDS
801: DGPLAMET
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L601]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.