Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G247600.1 | Wheat | cytosol, mitochondrion | 98.97 | 98.97 |
| TraesCS5A01G249700.1 | Wheat | cytosol | 95.76 | 95.65 |
| HORVU5Hr1G070390.9 | Barley | cytosol, nucleus, plastid | 90.26 | 89.34 |
| Os09t0471900-01 | Rice | nucleus | 80.07 | 79.43 |
| EER96904 | Sorghum | nucleus | 77.55 | 77.46 |
| Zm00001d020810_P002 | Maize | nucleus | 76.52 | 75.14 |
| KRH59299 | Soybean | cytosol | 24.51 | 67.3 |
| GSMUA_Achr7P19120_001 | Banana | nucleus | 56.01 | 58.77 |
| TraesCS4D01G060100.1 | Wheat | plastid | 54.18 | 57.06 |
| KRH43150 | Soybean | nucleus | 52.58 | 55.98 |
| VIT_07s0191g00040.t01 | Wine grape | nucleus | 53.61 | 55.91 |
| CDY68255 | Canola | cytosol, mitochondrion | 45.59 | 55.74 |
| Bra011816.1-P | Field mustard | cytosol, mitochondrion | 45.59 | 55.74 |
| CDX89460 | Canola | nucleus | 49.83 | 55.63 |
| CDX69365 | Canola | cytosol | 45.82 | 55.25 |
| CDX76928 | Canola | nucleus | 50.74 | 54.89 |
| Bra030242.1-P | Field mustard | nucleus | 49.83 | 54.85 |
| CDY13765 | Canola | nucleus | 50.86 | 54.81 |
| Bra038528.1-P | Field mustard | nucleus | 50.86 | 54.81 |
| CDY25593 | Canola | nucleus | 49.71 | 54.73 |
| CDY15291 | Canola | nucleus | 9.51 | 53.55 |
| AT2G22400.1 | Thale cress | cytosol | 49.26 | 53.22 |
| KRH31314 | Soybean | cytosol | 49.48 | 52.94 |
| Solyc05g051520.2.1 | Tomato | nucleus | 49.26 | 52.25 |
| Solyc11g010110.1.1 | Tomato | nucleus | 52.12 | 51.82 |
| PGSC0003DMT400041672 | Potato | nucleus | 51.89 | 51.59 |
| AT4G40000.1 | Thale cress | nucleus | 45.7 | 50.96 |
| KRH59300 | Soybean | mitochondrion | 26.12 | 47.01 |
| KRG97553 | Soybean | extracellular, plasma membrane | 21.19 | 45.01 |
| KRH45277 | Soybean | cytosol | 4.81 | 38.18 |
| TraesCS6D01G171500.1 | Wheat | plastid | 8.59 | 14.82 |
| TraesCS6D01G267300.1 | Wheat | plastid | 12.6 | 14.34 |
| TraesCS5D01G260700.1 | Wheat | mitochondrion | 8.48 | 13.01 |
Protein Annotations
| MapMan:16.6.7.8 | Gene3D:3.40.50.150 | InterPro:Fmu/NOL1/Nop2p_CS | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016428 |
| GO:GO:0016740 | InterPro:IPR001678 | InterPro:MeTrfase_RsmB/NOP2 | PFAM:PF01189 | PRINTS:PR02008 | PRINTS:PR02011 |
| ScanProsite:PS01153 | PFscan:PS51686 | PANTHER:PTHR22808 | PANTHER:PTHR22808:SF14 | InterPro:RCMT | InterPro:RCMT_NCL1 |
| InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS5D01G256900 | EnsemblPlants:TraesCS5D01G256900.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr5D:+:362992599..362999882
Molecular Weight (calculated)
97469.5 Da
IEP (calculated)
5.382
GRAVY (calculated)
-0.519
Length
873 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGRKRGRS QRRHFKQERE NVWKDNPRRP PASAGEGGEG NGWQPFATEN LAFEAYYKGQ QIVPEEEWDA FMSMLRKPLP AAFRINASCQ FYQDICSQLE
101: NDFRKSLESE VSDDHEKEAI RPLAWYPGNL AWHLNFSRMQ LRRNQALESF HEFLKQENEV GNITRQEAVS MVPPLFLNVQ PDHHILDMCA APGSKTFQLL
201: EMIHQSTKPG VLPTAMVVAN DVDVQRCNLL IHQTKRMCTA NLIVTNHEAQ NFPGCSLAKF CPEACAESKL QRLEFDRILC DVPCSGDGTA RKAPDMWRTW
301: NIGMGNGLHR LQVEIAMRGI GLLKVGGRMV YSTCSMNPVE NEAVVGEILR RCGDSVELLD VSNELPELIR RPGLRTWKVR DRASWLGSHN DVLHYRKNAI
401: LPSMFPSGKG TTDSCTAGGS VEVNINAVDA DMNESGDMVE GKEETKIATS DSNNGDNANT EEIKQDESES VKVSRGSDEK TDSASIVTEH SNLPLHRCMR
501: IIPHDQNSGA FFIAVLQKLS PLNESLVVEV MKGERSTSKD KALKCSNGQG SDTVPAEEIS VQQPGVDDTH VLVEQQNRDM DTEISKDKSS EEAKVVAGEA
601: QNDQATRRDK RKTQNQGRWR GVDPVIFFKD EATIRSIVSF YGIKDSFALE GHLVTRNPDT NHVKRIYYVS KSVKEVLDLN LKVGERLKIT SLGLKIFERQ
701: SSKEGSPCTF RLSSEGLPLL LPYITKQILY ASAIDFQHLL QYRIIKFPDF VDAKFGEQAS ALLQGCCVVI LREGHEDLES IGMDPSAIAV VCWKGKTNLC
801: VMVTPMDGRE LLERISFRFG LKIPKVDDGK PDLKSDDGSD EQPDGGAETV DPDCVPESKA SEDMDISDVK DTE
101: NDFRKSLESE VSDDHEKEAI RPLAWYPGNL AWHLNFSRMQ LRRNQALESF HEFLKQENEV GNITRQEAVS MVPPLFLNVQ PDHHILDMCA APGSKTFQLL
201: EMIHQSTKPG VLPTAMVVAN DVDVQRCNLL IHQTKRMCTA NLIVTNHEAQ NFPGCSLAKF CPEACAESKL QRLEFDRILC DVPCSGDGTA RKAPDMWRTW
301: NIGMGNGLHR LQVEIAMRGI GLLKVGGRMV YSTCSMNPVE NEAVVGEILR RCGDSVELLD VSNELPELIR RPGLRTWKVR DRASWLGSHN DVLHYRKNAI
401: LPSMFPSGKG TTDSCTAGGS VEVNINAVDA DMNESGDMVE GKEETKIATS DSNNGDNANT EEIKQDESES VKVSRGSDEK TDSASIVTEH SNLPLHRCMR
501: IIPHDQNSGA FFIAVLQKLS PLNESLVVEV MKGERSTSKD KALKCSNGQG SDTVPAEEIS VQQPGVDDTH VLVEQQNRDM DTEISKDKSS EEAKVVAGEA
601: QNDQATRRDK RKTQNQGRWR GVDPVIFFKD EATIRSIVSF YGIKDSFALE GHLVTRNPDT NHVKRIYYVS KSVKEVLDLN LKVGERLKIT SLGLKIFERQ
701: SSKEGSPCTF RLSSEGLPLL LPYITKQILY ASAIDFQHLL QYRIIKFPDF VDAKFGEQAS ALLQGCCVVI LREGHEDLES IGMDPSAIAV VCWKGKTNLC
801: VMVTPMDGRE LLERISFRFG LKIPKVDDGK PDLKSDDGSD EQPDGGAETV DPDCVPESKA SEDMDISDVK DTE
001: MGRGGRHRGR TQRKDFKESR ENVWKRPKSD ASVDGSDNAV PEQKPTWEPI VTVNPNFEEY YKKQGIVKAE EWDLFMEILR KPLPAAFRVN SNGQFCDEII
101: SILENDFMKS LQAEAIEGGE LEAIKPLPWY PKNLAWHSNF SRKEIRKNQT LERFHEFLKL ENEVGNITRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT
201: FQLLEIIHEA SEPGSLPNGL VVANDVDFKR SNLLIHQTKR MCTSNLIVTN HEGQQFPGCR LNKSRASEKG ISENMPINQL AFDRVLCDVP CSGDGTLRKA
301: PDIWRKWNSG MGNGLHSLQI ILAMRGLSLL KVGGKMIYST CSMNPVEDEA VVAEILRRCG DSVELLDVSD KLPELIRRPG LKAWKVRDKG GWFTSYKDVP
401: QNRRGGVLVS MFPSGKYLKD STETTEKNEN GDVNGCEDGL KETDISVVDA TPEEQAEEVS DLPLERCMRI IPHDQNTGAF FIAVLQKKSP LPEFQEKPNT
501: KRNSTAKSTD STEKSPSKES VVTVDAGVPD ESAVEKVIEA DSNIEKNDSL EPEKKITEGE SITEDKEANS SNAGGKRKVP MQGKWKGFDP VVFVKDETVI
601: NGIKEFYGIK DESFPLHGHL VARNTDTSSV KRIYYVSKSV KEVLQLNFAV GQQLKIASVG LKMFERQSAK EGSSTLCPFR ISSEGLPVIL PYITKQVLYT
701: PMADFKLLLQ DKSIKFHDFV NPQLAQKATD LVMGSCVVIL SDGEVPVKAD ASTIAISCWR GKASLAVMAT VADCQELLER FAEKTPKTEG GSVNGSNGDS
801: DGPLAMET
101: SILENDFMKS LQAEAIEGGE LEAIKPLPWY PKNLAWHSNF SRKEIRKNQT LERFHEFLKL ENEVGNITRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT
201: FQLLEIIHEA SEPGSLPNGL VVANDVDFKR SNLLIHQTKR MCTSNLIVTN HEGQQFPGCR LNKSRASEKG ISENMPINQL AFDRVLCDVP CSGDGTLRKA
301: PDIWRKWNSG MGNGLHSLQI ILAMRGLSLL KVGGKMIYST CSMNPVEDEA VVAEILRRCG DSVELLDVSD KLPELIRRPG LKAWKVRDKG GWFTSYKDVP
401: QNRRGGVLVS MFPSGKYLKD STETTEKNEN GDVNGCEDGL KETDISVVDA TPEEQAEEVS DLPLERCMRI IPHDQNTGAF FIAVLQKKSP LPEFQEKPNT
501: KRNSTAKSTD STEKSPSKES VVTVDAGVPD ESAVEKVIEA DSNIEKNDSL EPEKKITEGE SITEDKEANS SNAGGKRKVP MQGKWKGFDP VVFVKDETVI
601: NGIKEFYGIK DESFPLHGHL VARNTDTSSV KRIYYVSKSV KEVLQLNFAV GQQLKIASVG LKMFERQSAK EGSSTLCPFR ISSEGLPVIL PYITKQVLYT
701: PMADFKLLLQ DKSIKFHDFV NPQLAQKATD LVMGSCVVIL SDGEVPVKAD ASTIAISCWR GKASLAVMAT VADCQELLER FAEKTPKTEG GSVNGSNGDS
801: DGPLAMET
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L601]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.