Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15291 | Canola | nucleus | 11.95 | 64.52 |
| Bra011816.1-P | Field mustard | cytosol, mitochondrion | 54.0 | 63.31 |
| CDY68255 | Canola | cytosol, mitochondrion | 54.0 | 63.31 |
| CDX69365 | Canola | cytosol | 54.48 | 62.98 |
| CDX89460 | Canola | nucleus | 58.54 | 62.66 |
| CDY25593 | Canola | nucleus | 58.54 | 61.79 |
| CDY13765 | Canola | nucleus | 59.5 | 61.48 |
| Bra030242.1-P | Field mustard | nucleus | 58.18 | 61.41 |
| Bra038528.1-P | Field mustard | nucleus | 59.38 | 61.36 |
| CDX76928 | Canola | nucleus | 58.78 | 60.97 |
| AT2G22400.1 | Thale cress | cytosol | 58.06 | 60.15 |
| PGSC0003DMT400041672 | Potato | nucleus | 62.84 | 59.91 |
| Solyc11g010110.1.1 | Tomato | nucleus | 62.6 | 59.68 |
| Solyc05g051520.2.1 | Tomato | nucleus | 58.66 | 59.66 |
| GSMUA_Achr7P19120_001 | Banana | nucleus | 57.35 | 57.69 |
| AT4G40000.1 | Thale cress | nucleus | 53.17 | 56.83 |
| TraesCS5A01G249700.1 | Wheat | cytosol | 56.15 | 53.78 |
| TraesCS5B01G247600.1 | Wheat | cytosol, mitochondrion | 56.03 | 53.72 |
| EER96904 | Sorghum | nucleus | 56.03 | 53.66 |
| TraesCS5D01G256900.1 | Wheat | cytosol | 55.91 | 53.61 |
| Os09t0471900-01 | Rice | nucleus | 56.15 | 53.41 |
| Zm00001d020810_P002 | Maize | nucleus | 56.63 | 53.32 |
| TraesCS4A01G254100.3 | Wheat | mitochondrion | 48.98 | 49.28 |
| TraesCS4B01G060400.1 | Wheat | mitochondrion, plastid | 48.98 | 49.22 |
| TraesCS4D01G060100.1 | Wheat | plastid | 48.51 | 48.97 |
| KXG25732 | Sorghum | mitochondrion | 47.91 | 47.46 |
| Zm00001d031265_P029 | Maize | mitochondrion | 46.59 | 47.27 |
| KRH45277 | Soybean | cytosol | 5.5 | 41.82 |
| VIT_19s0015g00840.t01 | Wine grape | nucleus | 7.53 | 24.51 |
| VIT_19s0015g00650.t01 | Wine grape | plastid | 9.44 | 15.05 |
| VIT_04s0008g01480.t01 | Wine grape | plastid | 8.96 | 14.76 |
| VIT_19s0015g00830.t01 | Wine grape | nucleus | 4.66 | 10.83 |
| HORVU6Hr1G034260.1 | Barley | extracellular | 0.6 | 7.25 |
Protein Annotations
| EntrezGene:100247473 | wikigene:100247473 | MapMan:16.6.7.8 | ProteinID:CBI33136 | ProteinID:CBI33136.3 | UniProt:D7TRL1 |
| EMBL:FN596027 | InterPro:Fmu/NOL1/Nop2p_CS | GO:GO:0001510 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0009987 | GO:GO:0016428 | GO:GO:0016740 | GO:GO:0030488 | GO:GO:0032259 | InterPro:IPR001678 |
| EntrezGene:LOC100247473 | wikigene:LOC100247473 | InterPro:MeTrfase_RsmB/NOP2 | PFAM:PF01189 | PRINTS:PR02008 | PRINTS:PR02011 |
| ScanProsite:PS01153 | PFscan:PS51686 | PANTHER:PTHR22808 | PANTHER:PTHR22808:SF14 | InterPro:RCMT | InterPro:RCMT_NCL1 |
| InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | TIGR:TC56098 | TIGR:TC58065 | UniParc:UPI0001BE3CFC | ArrayExpress:VIT_07s0191g00040 |
| EnsemblPlantsGene:VIT_07s0191g00040 | EnsemblPlants:VIT_07s0191g00040.t01 | unigene:Vvi.11888 | RefSeq:XP_002271053 | RefSeq:XP_002271053.2 | RefSeq:XP_010652673.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7:-:14791144..14804501
Molecular Weight (calculated)
93590.1 Da
IEP (calculated)
5.373
GRAVY (calculated)
-0.511
Length
837 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGGRGGRN RARTQRKHFR ENRENVWKRS RHESSDSNTN SGWEPFATQN PAFDEYYKEQ GIVSLEEWDT FNSVIRKPLP AAFRVNSSSQ FCADILSQLE
101: NDFMKSLQTE ATDGGEVEAI RPLPWYPENL AWQSNYSRMQ LRKNQTLERF HEFLKQENEI GNITRQEAVS MVPPLFLDVS PDHFVLDMCA APGSKTFQLL
201: EIIHRSTKPG TLPGGMVVAN DVDVKRCNLL IHQTKRMCTA NLIVTNHEAQ HFPGCCLNKL SSDSSEIGVV KEQSMSQLMF DRVLCDVPCS GDGTLRKAPD
301: IWRKWNVGMG NGIHCLQVQI AMRGISLLKV GGRMVYSTCS MNPVENEAVV AEILRRCGGS VELVDVSCEL PQLVRRPGLK KWKVRDKGMW LASYKDVPKF
401: RRAGIVPSMF PSGQSATDPT DNEQDVSLGE KHENGGDVNS ENGFQPTENP ETLEEVSDHP LQRCIRIVPH DQNTGAFFIA VLHKLSPLPA IQEKSVNLQR
501: NLHSNNEERS EKLSNEIIES PNINQEDDTD EKFPETASDT DLVENEPDET ASEHDPCQPC EENKPEEVPG DRENDPKKAG GKRKLQIQGK WKGVDPVVFF
601: KDEATINSIK TFYGVGDSLV LNGQLVTRNS DSKHVKRIYY ISKSVKDVLE LNLLVGQQLK ITSVGLKMFE RQTSREGTST SCAFRISSEG LPLLLPYITK
701: QILCASPVDF KHLLQYKTIR YADFVDAEFG EKASKLMLGC CVVILKKGTQ ASVDPIQVDV STIAIGCWKG RASLTVMVTA IECQEMQERL LMRLEGVNGT
801: SPVENISSDV ADESKVEESN DVEMNEETEP VKMATAG
101: NDFMKSLQTE ATDGGEVEAI RPLPWYPENL AWQSNYSRMQ LRKNQTLERF HEFLKQENEI GNITRQEAVS MVPPLFLDVS PDHFVLDMCA APGSKTFQLL
201: EIIHRSTKPG TLPGGMVVAN DVDVKRCNLL IHQTKRMCTA NLIVTNHEAQ HFPGCCLNKL SSDSSEIGVV KEQSMSQLMF DRVLCDVPCS GDGTLRKAPD
301: IWRKWNVGMG NGIHCLQVQI AMRGISLLKV GGRMVYSTCS MNPVENEAVV AEILRRCGGS VELVDVSCEL PQLVRRPGLK KWKVRDKGMW LASYKDVPKF
401: RRAGIVPSMF PSGQSATDPT DNEQDVSLGE KHENGGDVNS ENGFQPTENP ETLEEVSDHP LQRCIRIVPH DQNTGAFFIA VLHKLSPLPA IQEKSVNLQR
501: NLHSNNEERS EKLSNEIIES PNINQEDDTD EKFPETASDT DLVENEPDET ASEHDPCQPC EENKPEEVPG DRENDPKKAG GKRKLQIQGK WKGVDPVVFF
601: KDEATINSIK TFYGVGDSLV LNGQLVTRNS DSKHVKRIYY ISKSVKDVLE LNLLVGQQLK ITSVGLKMFE RQTSREGTST SCAFRISSEG LPLLLPYITK
701: QILCASPVDF KHLLQYKTIR YADFVDAEFG EKASKLMLGC CVVILKKGTQ ASVDPIQVDV STIAIGCWKG RASLTVMVTA IECQEMQERL LMRLEGVNGT
801: SPVENISSDV ADESKVEESN DVEMNEETEP VKMATAG
001: MGRGGRHRGR TQRKDFKESR ENVWKRPKSD ASVDGSDNAV PEQKPTWEPI VTVNPNFEEY YKKQGIVKAE EWDLFMEILR KPLPAAFRVN SNGQFCDEII
101: SILENDFMKS LQAEAIEGGE LEAIKPLPWY PKNLAWHSNF SRKEIRKNQT LERFHEFLKL ENEVGNITRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT
201: FQLLEIIHEA SEPGSLPNGL VVANDVDFKR SNLLIHQTKR MCTSNLIVTN HEGQQFPGCR LNKSRASEKG ISENMPINQL AFDRVLCDVP CSGDGTLRKA
301: PDIWRKWNSG MGNGLHSLQI ILAMRGLSLL KVGGKMIYST CSMNPVEDEA VVAEILRRCG DSVELLDVSD KLPELIRRPG LKAWKVRDKG GWFTSYKDVP
401: QNRRGGVLVS MFPSGKYLKD STETTEKNEN GDVNGCEDGL KETDISVVDA TPEEQAEEVS DLPLERCMRI IPHDQNTGAF FIAVLQKKSP LPEFQEKPNT
501: KRNSTAKSTD STEKSPSKES VVTVDAGVPD ESAVEKVIEA DSNIEKNDSL EPEKKITEGE SITEDKEANS SNAGGKRKVP MQGKWKGFDP VVFVKDETVI
601: NGIKEFYGIK DESFPLHGHL VARNTDTSSV KRIYYVSKSV KEVLQLNFAV GQQLKIASVG LKMFERQSAK EGSSTLCPFR ISSEGLPVIL PYITKQVLYT
701: PMADFKLLLQ DKSIKFHDFV NPQLAQKATD LVMGSCVVIL SDGEVPVKAD ASTIAISCWR GKASLAVMAT VADCQELLER FAEKTPKTEG GSVNGSNGDS
801: DGPLAMET
101: SILENDFMKS LQAEAIEGGE LEAIKPLPWY PKNLAWHSNF SRKEIRKNQT LERFHEFLKL ENEVGNITRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT
201: FQLLEIIHEA SEPGSLPNGL VVANDVDFKR SNLLIHQTKR MCTSNLIVTN HEGQQFPGCR LNKSRASEKG ISENMPINQL AFDRVLCDVP CSGDGTLRKA
301: PDIWRKWNSG MGNGLHSLQI ILAMRGLSLL KVGGKMIYST CSMNPVEDEA VVAEILRRCG DSVELLDVSD KLPELIRRPG LKAWKVRDKG GWFTSYKDVP
401: QNRRGGVLVS MFPSGKYLKD STETTEKNEN GDVNGCEDGL KETDISVVDA TPEEQAEEVS DLPLERCMRI IPHDQNTGAF FIAVLQKKSP LPEFQEKPNT
501: KRNSTAKSTD STEKSPSKES VVTVDAGVPD ESAVEKVIEA DSNIEKNDSL EPEKKITEGE SITEDKEANS SNAGGKRKVP MQGKWKGFDP VVFVKDETVI
601: NGIKEFYGIK DESFPLHGHL VARNTDTSSV KRIYYVSKSV KEVLQLNFAV GQQLKIASVG LKMFERQSAK EGSSTLCPFR ISSEGLPVIL PYITKQVLYT
701: PMADFKLLLQ DKSIKFHDFV NPQLAQKATD LVMGSCVVIL SDGEVPVKAD ASTIAISCWR GKASLAVMAT VADCQELLER FAEKTPKTEG GSVNGSNGDS
801: DGPLAMET
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L601]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.