Factsheet for VIT_19s0015g00830.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75188	Soybean	cytosol	53.06	61.02
CDX91690	Canola	cytosol, plastid	32.5	57.07
CDY62126	Canola	cytosol	35.83	56.33
CDY65896	Canola	nucleus	34.72	54.82
CDY17518	Canola	cytosol	30.0	52.68
KRH46413	Soybean	nucleus	71.67	42.02
KRG98455	Soybean	nucleus	71.39	41.45
CDY06532	Canola	cytosol	42.5	40.91
PGSC0003DMT400057532	Potato	nucleus	66.39	37.52
Bra026418.1-P	Field mustard	plastid	64.44	36.19
Bra002867.1-P	Field mustard	mitochondrion, nucleus	62.5	34.14
Solyc07g052110.2.1	Tomato	nucleus	66.94	34.14
Bra035594.1-P	Field mustard	nucleus	60.56	34.06
GSMUA_Achr7P20140_001	Banana	nucleus	56.11	33.72
AT5G55920.1	Thale cress	nucleus	60.0	31.67
AT4G26600.5	Thale cress	plastid	61.67	31.62
Os02t0724600-01	Rice	nucleus	56.94	29.58
Os09t0551300-02	Rice	nucleus	56.94	29.33
KXG30856	Sorghum	nucleus, plastid	55.0	28.61
Zm00001d017887_P004	Maize	plastid	56.94	27.93
Zm00001d051652_P003	Maize	plasma membrane	55.56	27.86
TraesCS6D01G267300.1	Wheat	plastid	56.67	26.6
HORVU6Hr1G072030.1	Barley	plastid	55.83	26.59
TraesCS6B01G315600.1	Wheat	plastid	55.83	26.31
TraesCS6A01G286600.1	Wheat	nucleus	55.83	26.0
VIT_19s0015g00650.t01	Wine grape	plastid	16.39	11.24
VIT_04s0008g01480.t01	Wine grape	plastid	11.67	8.27
VIT_07s0191g00040.t01	Wine grape	nucleus	10.83	4.66
VIT_19s0015g00840.t01	Wine grape	nucleus	1.94	2.72

Protein Annotations

EntrezGene:100265196	wikigene:100265196	MapMan:17.1.2.2.3.6	Gene3D:3.30.70.3130	Gene3D:3.40.50.150	EMBL:AM432751
ProteinID:CAN71575	ProteinID:CAN71575.1	ProteinID:CBI39767	ProteinID:CBI39767.3	ncoils:Coil	UniProt:D7UAK2
EMBL:FN596747	GO:GO:0000470	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730
GO:GO:0006139	GO:GO:0006364	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008757	GO:GO:0009383	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0032259	GO:GO:0055085	GO:GO:0070475	InterPro:IPR001678	EntrezGene:LOC100265196	wikigene:LOC100265196
InterPro:MeTrfase_RsmB/NOP2	InterPro:Methyltr_RsmF_N	PFAM:PF01189	PFAM:PF17125	PRINTS:PR02012	PFscan:PS51686
PANTHER:PTHR22807	PANTHER:PTHR22807:SF30	InterPro:RCMT_NOP2	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0001BE5396
ArrayExpress:VIT_19s0015g00830	EnsemblPlantsGene:VIT_19s0015g00830	EnsemblPlants:VIT_19s0015g00830.t01	unigene:Vvi.2490	SEG:seg	:

Description

No Description!

Coordinates

chr19:+:8940759..8945633

Molecular Weight (calculated)

40588.2 Da

IEP (calculated)

4.383

GRAVY (calculated)

-0.844

Length

360 amino acids

Sequence
(BLAST)

001: MAPAALNKKK VTKSQKPPAQ KKQKKEVFTA KPPKKHDISD DSDSPTEEIV DHEGLFEEEN EEDGFDSHSE ASSDGDDPFT DDFLQGGDDE EEGSGSGSGS
101: DSDSDSDSDE SDIEKKSRAI DEERAREEEE AGAEMQLNIK EESDEFRLPT KEELQEEARQ PPDLPNLQRR IKEIVRVLSN FNSLRQEGAQ RKDYVEQLRV
201: DLGSYYGYNE FLIGVLVEMF PVVELMELIE AFEKPRPICL RTNTLKTRRR DLADVLLNRG VNLDPLSKWS KVGLVVYDSQ VPIGATPEYM AGFYMLQSAS
301: SFLPVMALAP QEKERIVDMA AAPGGKTTYI AALMKNGGLH RWEDNLHCCS YEKQRDDLRK

Best Arabidopsis Sequence Match ( AT4G26600.8 )
(BLAST)

001: MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPENEAVIDY ALKNRDVKLV
501: PCGLDFGRPG

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.